KEGG   Fusarium pseudograminearum: FPSE_11603
Entry
FPSE_11603        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_11603
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_11603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_11603
   03041 Spliceosome [BR:fpu03041]
    FPSE_11603
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     FPSE_11603
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_11603
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FPSE_11603
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd DSE1_N Beta-prop_WDR19_1st CFAP251_N Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR41 Ras
Other DBs
NCBI-GeneID: 20370220
NCBI-ProteinID: XP_009262995
UniProt: K3V515
LinkDB
Position
1:<4175309..>4176555
AA seq 336 aa
MAPVLRARQSLSKDKFSSYFGNLRSQPYNDANNSRGSNPHSLRCIAWNPLGTLVATGSSE
KTLRVWNPEKPHVKFSTELKGHSASIEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGNSLLVGNKADTIYVLSPTQSTPISTHQQSVQTNQIAFCWSGEK
IFVTTAEGRIRVLSYPGFEPVLQSNHGDENSEYELNGHTSSCLTADLQPTGRYLATGGSD
SVIALWDTTDWVCQRTITRMVGPVKSLSFTFDGSFVVGGSDEGSGLEISHVETGEHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcgcctgtcctccgagcaaggcagagtctgtccaaggacaagttctccagctacttc
gggaacctgaggagtcaaccctacaacgatgccaataattcgcggggttcaaatcctcac
agcctacgctgcattgcgtggaatcccctcggaaccctggtagcaacaggctcatcagag
aagactctacgagtgtggaaccccgagaaacctcatgtgaagttctcgacggagctcaag
ggtcactcagcatctattgaaaaggtagctttcaatccaaccaaggatgcagagctctgc
agtgtgagcagtgacggtgtggtcaaattttgggacgtgcggacgaaagcctgcttcaac
gaagtcaaaggacttggagacgccttcactctcgtgtgggcgccagacggtaactcgctt
ctcgtcgggaacaaggcagacactatctacgttctatcaccgactcaatccacgcccatc
agcactcatcaacagtcggtgcagaccaaccagatcgcattctgttggagcggcgagaag
atattcgtgaccacggcagaaggccgcattcgggttctgtcgtatccgggttttgagcct
gtgcttcagagcaatcacggtgatgaaaatagcgagtatgagcttaacgggcatacctcg
tcatgcctgaccgcggatctacagcctactggacgatatctggcgacgggtggctcagac
tcggtcattgcattgtgggataccacggactgggtatgccagaggacgattaccaggatg
gttggccctgtcaagagtctcagcttcacatttgacggtagttttgttgtgggtggcagt
gatgaaggatctgggctggagatatcacatgttgaaacaggagagcatgtacacacattc
aagacggctggtgcttgtcccgtagtcgcctgggctccaacgcggtattgccttgcgtac
agcgatcttgggatcttgaggattgtgggtgttgacgttgacagaaaataa

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