Fusarium pseudograminearum: FPSE_11653
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Entry
FPSE_11653 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_11653
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPSE_11653
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
Helicases
FPSE_11653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF4736
Motif
Other DBs
NCBI-GeneID:
20370270
NCBI-ProteinID:
XP_009263045
UniProt:
K3UA21
LinkDB
All DBs
Position
1:complement(2757852..2759933)
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AA seq
693 aa
AA seq
DB search
MDILKLLSRGTKKTQKGSQNAFNPQQKLPSAGTSTNPQLYHDQVRGHKRKRTKNESEPEV
KVDLPEVDFFAPKPEPVAEAPVEVEEPVQAPKPTRSSRLLSEDECRQLLRSHRLKITLLS
KTEDQSKVKKSKKKKKAAVEVKKDSKKQLFPQPLDSFGELRNAYGLSDKVADNLVFQGYR
VPTEVQMGSLPLLVHPQAALKDEDGLGGGVDFLAIAPTGSGKTISFLIPAINNILRRRSE
ENTGNIHELEAVIVAPTRELVHQIVSEGQKLCKGTGLKVVSMKKHTHLSADQVDMAEDSS
EDEEDKESESEDDDKKPSDDKPKQITTPDILVTTPFLLFKFLTSGPPSTQKVLPTVRDLI
LDEADVLLDPLFRDATMADWTACTNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITP
KPFVRLVVGLKDTAVPNIAHKLIYTASEQGKLLALRQLLHPTASDDSGPPLRPPFLVFTQ
TIDRATALHEELQYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLA
RGVDFAGVNGVVNYDVPGSSAGYVHRAGRTGRAGREGGIAVTFYTKEDIPFVKMVANVIA
VSEKQAGKTGDEAGVQKWLLDALPNVGKADRKKLKERGNEARRSGVKSKISSKSGYERRR
ENNRLGAIEGSKKRKLQANDDSGDDGEWGGIDD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaagctcctatcgcgtggaaccaaaaagactcaaaagggttctcaaaat
gccttcaaccctcagcagaagcttccctctgccggcaccagcacgaacccccagctgtac
cacgaccaagtccgaggccataaacgaaagcgaacaaagaatgaatccgaacccgaagtt
aaagtagacctgcccgaagtcgacttctttgcacccaagcctgagcccgtcgccgaagca
cctgtcgaggtggaagaacctgtccaggcgccgaaacctacgcggtcatctcgactattg
agcgaggacgagtgtcgccagcttctgcgatcgcatcgactcaagattactctactttca
aagaccgaagaccagtccaaggttaagaagagtaaaaagaagaaaaaggcagccgtcgaa
gtcaagaaggatagcaagaagcagctcttcccgcaacccttggactctttcggcgagctt
cgaaatgcctacggcctctcagacaaggtcgccgacaacctcgtgttccagggataccga
gttcctactgaagtccaaatgggcagtctacctctcctggttcatccccaagctgcattg
aaggacgaggatggattgggtggaggtgtcgactttctcgctattgcgcctacaggaagt
ggaaagacaattagtttcttgatccctgctatcaacaacatcttgcgcaggcgctctgaa
gaaaacaccggcaacatccatgagctcgaagccgttattgttgcgccaacccgagaactg
gtgcaccagatcgttagcgaaggacaaaagttgtgcaagggtacagggctcaaagttgtg
tctatgaagaagcacacccatctatcagctgatcaggtggatatggcagaggacagctct
gaagacgaagaggataaggagtcagaatcagaagatgatgacaagaaaccctctgatgac
aagcccaaacaaatcaccacgcctgatatcttggtcaccacacccttccttctattcaag
tttctcacctctggaccccctagcacacaaaaggtcctgcctactgtacgagatctaatt
ctggacgaggcagatgttttgcttgatcctcttttccgagacgctacaatggccgactgg
acagcatgcacaaacaccaaccttcgggtttcgttctggtctgctaccatgggatccaac
atcgagtctatggtcacggagaagttgacctcaagagcacagtctttggacatcacaccg
aagccctttgttcgattggttgtcggtctcaaggatacagccgtgccaaacatcgctcac
aagctcatctacactgcatccgagcaaggaaaactgcttgctctgcgtcaactgctacac
cctacagccagtgatgattcgggtcctccactacgacctcctttcctagtctttacacaa
actattgacagagcaactgctttacacgaagagttgcagtacgatatccccctcgaggct
ggtggcgctgcaagaattgccgccttgcacagtgggcttactgactctgctcgctcttcc
atcatgcgtaagttccgtgctggtgacatttggattttaatcacaaccgacgtgctagcg
cgaggcgtagactttgccggcgtcaatggcgttgtcaattatgatgtgccaggttccagc
gccggttacgtccatcgcgctggacgaacaggccgtgctggacgtgaaggtggtattgca
gtcaccttctacactaaggaggacattccttttgtcaagatggttgccaacgtgatcgct
gtcagcgagaagcaggccggaaagaccggagacgaggctggagtgcaaaagtggctgctc
gatgctctgccaaacgttggcaaggcggaccgcaagaagctcaaggagagaggtaacgag
gcgcgacgaagcggcgtcaagtccaagatctcatccaagagtggctacgagagacgcagg
gagaacaaccgtcttggcgctatcgagggaagcaagaagagaaaattacaggccaacgat
gacagcggcgatgatggagaatggggtggcatcgacgattaa
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