KEGG   Fusarium pseudograminearum: FPSE_11685
Entry
FPSE_11685        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03015  mRNA surveillance pathway
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_11685
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_11685
   03015 mRNA surveillance pathway
    FPSE_11685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_11685
   03041 Spliceosome [BR:fpu03041]
    FPSE_11685
Enzymes [BR:fpu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     FPSE_11685
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FPSE_11685
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_11685
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FPSE_11685
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 DUF4844 DUF6066
Other DBs
NCBI-GeneID: 20370302
NCBI-ProteinID: XP_009263077
UniProt: K3VX10
LinkDB
Position
2:complement(2209788..2211764)
AA seq 434 aa
MSHEEDLIDYSDEEIGGNETAATASNGKKGELAAGNNVDKKGSYVGIHSTGFRDFLLKAE
LLRAIADCGFEHPSEVQQTCIPQALLGGDIICQAKSGLGKTAVFVLATLQQVEPVNGEVS
VVVMCHTRELAYQIRDEYNRFSKYMPDIKTGVFYGGTPIKTDVETLKNKETCPHIIVGTP
GRLKALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPQQKQVMMFSATLSE
EVKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDDLQFNQVIIF
VRSTVRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFKKRICVATDVFGRGIDI
ERINLAINYDLSNDASSYLHRVGRAGRFGTKGLAISFVSTDQDQEVLKEIEKRFEVALPE
FPKEGVDASTYMAS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtctcacgaggaagatctcatcgattactccgacgaggagatcggtggcaacgagacc
gccgcgactgcctccaacggcaagaagggcgagctcgccgccggtaacaatgtcgacaag
aagggcagctacgttggtattcattcgaccggtttccgcgatttcctcctgaaggctgag
ttgcttcgcgccatcgccgactgcggtttcgagcatccatcggaggtccaacaaacctgt
atcccccaggcgctcctcggtggtgacattatctgtcaggccaagtccggtctgggtaag
acagctgtcttcgttcttgctacgcttcagcaagtcgagcccgtgaacggagaggtctcc
gtggttgtcatgtgtcacactcgtgagctggcctaccagatccgcgacgagtacaaccgc
ttcagcaagtacatgcccgacatcaagaccggtgtcttctatggtggtactcccatcaag
accgatgtggagacactcaagaacaaggagacctgccctcacatcattgtcggtactcct
ggtcgtctcaaggctcttgtccgtgacaaggctctgcgtcttggcagcgttcgcatcttt
gtcctcgacgagtgtgacaagatgctcgatcagcctgacatgcgcactgatgtgcaggac
gttttccgtgctactcctcagcagaagcaggtgatgatgttctcggccaccctttccgag
gaagtcaagcctatctgccgaaagttcatgcagaaccctaccgagcactacgtcgatgag
gacaccaagctcactctccacggtctccagcagtactacatcaagctggaagagaaggag
aagaaccgcaagctcaacgagctcctggatgatctccagttcaaccaggtcatcatcttt
gtgcgcagcactgtccgcgccactgagcttgacaagcttctccgagagtgcaacttccct
tcgatcgccgttcactctggtgtcagtcaggaagaacgtatccgtcgttacaaggagttc
aaggagttcaagaagagaatctgcgttgctaccgacgttttcggacgaggtatcgacatt
gagcgtatcaacctggcgatcaactacgatctgtccaacgatgccagctcttacctgcac
cgtgtgggtcgtgctggacgattcggtaccaagggtttggccatctcgttcgtcagcacc
gaccaagaccaagaggtgctcaaggaaattgagaagcgattcgaggtcgctctacctgag
ttccccaaggagggtgtcgacgccagcacttacatggcttcttaa

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