KEGG   Fusarium pseudograminearum: FPSE_11810
Entry
FPSE_11810        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03015  mRNA surveillance pathway
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_11810
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_11810
   03015 mRNA surveillance pathway
    FPSE_11810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_11810
   03041 Spliceosome [BR:fpu03041]
    FPSE_11810
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FPSE_11810
    TREX complex
     FPSE_11810
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_11810
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FPSE_11810
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 20370427
NCBI-ProteinID: XP_009263202
UniProt: K3V4Z3
LinkDB
Position
4:complement(1577254..1578809)
AA seq 357 aa
MADKMDRGLDEIIADTRSNRPRNSRGQGRRREPRNDFPRDGVRKVDFPRSPMMPTRPVQP
SSQLILSMLGALSVRDDSRNIDSEWVHDRFEENNNRRAPAPRRRRESPEQDSKGTKIRVD
NIHYDLTDDDLSELFQRIGPISRLQLRYDRAGRSEGTAYVTYERNEDAKAAVLEFDRANA
NGQPIYLTLLPSRNPFDTAVMPGRSLAERISSPGDRRSHSPHRQRDDDDAARRGIDRYVP
GQGSRRSPMPRGRGQGQGQGQGRGQGGRRPGARRDGREGGREGGREGGRDQDGGRGGRGN
RPSKKTQEELDAEMADYFGGDSAPAEPANQQDAPPAQAPAAAQPQVHAAADDIDMIE
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggctgataagatggatcgcggtctcgatgagatcattgctgatactcgctccaatcga
cctcgcaacagccgtggccaaggtcgccgacgtgaaccgcgtaacgatttccctcgcgat
ggtgttagaaaggtggacttccctcgctctccaatgatgcctactcgacctgtacaaccc
tcctcgcaactcatcctttcgatgctcggagctctttctgttcgcgacgattcacgaaac
atcgacagtgaatgggtccacgaccgattcgaagagaataacaaccgccgggcacctgct
cctcgtcgccgccgcgagtcgccggaacaagattccaagggcacaaagatccgcgtcgat
aacatccattacgacctcaccgacgatgacctttctgagctcttccaaagaattggaccc
atcagtcgcctccagctacgatatgatcgcgctggacgatctgagggcactgcctacgtg
acctacgaacggaacgaagacgccaaggcagcggtcctggaattcgatcgtgcaaatgcc
aacggccagcctatttatttgactcttctgcctagccgaaacccattcgatactgccgtt
atgcccggccgttcgcttgcagagcgtatttcgagcccaggagacagaagatcgcattcg
ccccaccgccaacgtgatgacgatgatgctgcccgcagaggaattgaccgatatgttcct
ggccaaggctctcgtcgaagcccaatgcctcgaggccgtggtcaaggtcaaggtcaaggc
caaggtcggggccagggtggtcgccgtcctggtgctcgacgtgatggcagagaaggaggc
agggaaggaggcagagagggaggtagagaccaggatggaggccgaggtggccgaggcaac
cgcccttccaagaagacacaagaagaactcgacgccgagatggccgactactttggagga
gacagcgcgcccgcagagcccgctaaccagcaagatgcacctcctgctcaagcacctgca
gctgcgcagcctcaagtacacgctgccgccgacgacatcgacatgattgagtaa

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