Fusarium pseudograminearum: FPSE_11861
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Entry
FPSE_11861 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_11861
03041 Spliceosome [BR:
fpu03041
]
FPSE_11861
03036 Chromosome and associated proteins [BR:
fpu03036
]
FPSE_11861
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPSE_11861
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FPSE_11861
mRNA cycle factors
Common to processing body (P body) and stress granule
FPSE_11861
Spliceosome [BR:
fpu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
FPSE_11861
Chromosome and associated proteins [BR:
fpu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FPSE_11861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
20370478
NCBI-ProteinID:
XP_009263253
UniProt:
K3VX03
LinkDB
All DBs
Position
4:1409084..1411191
Genome browser
AA seq
683 aa
AA seq
DB search
MADQINMGGLSLNEGGHQGPPQGRSYIPPHMRGRGGPPPAGPQAGPQAGPPAMNGGPPPA
APGPNGIGNSAWANQNYGARQNNWSNDVPTFQGNNNRRGGGGWGGRGGGYSGGGNFDGHS
GGGGGGAPTARGSGDGQWRDGKHIPGPANPRVERELFGVTAEDPSKQHTGINFEKYDDIP
VEASGTDVPEPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTG
SGKTGGFLFPILSQAFLNGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRK
FAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDE
ADRMLDMGFEPQIRRIVEGEDMPQVQDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRV
GSTSENITQKVEYVEDVDKRSVLLDILHSHANGLTLIFVETKRMADSLSDFLINQNFPAT
SIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRI
GRTGRAGNTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLETIARESSFGGGGRGGRS
RGGGGRGGGATRDFRKFGGGGFGGNNNGGGGGFNNAGSQGAGFSAGGGGGAGYGGGAGYG
GGAGYGGGGYGNPSGPGAQSSWW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagatcaacatgggtggcctctccctcaacgaaggcggtcatcaaggccct
ccccagggtcgatcctacattccccctcacatgcgtggccgtggtggtcctccccccgcc
ggtccccaagctggcccccaagctggtcctcccgccatgaacggtggtcctcctcctgct
gcccccggtcccaacggcatcggcaacagtgcctgggctaaccaaaactacggcgcccgc
caaaacaactggagcaacgatgttcctactttccagggcaacaataaccgccgaggcggc
ggcggctggggcggtcgaggtggtggctacagcggtggcggcaacttcgacggccactct
ggtggtggtggtggtggtgctcccactgcccgcggatctggtgatggacaatggcgcgat
ggcaagcacatccccggcccggccaacccccgtgtcgagcgcgagcttttcggtgttact
gccgaggacccttccaagcaacacactggtatcaacttcgagaagtacgacgacatcccc
gttgaggcttccggtacagacgttcccgagcctgttcaccagtttaccacccctcctctg
gacgagcacttgtgccgcaacattgagctcgctcactacaaggtccctacacctgttcag
aagtactcgatccctatcgttagcggcggtcgtgatctgatggcttgtgcccagaccggt
tccggaaagactggtggtttcttgttccctatcctctctcaggctttcctcaacggacct
tctgccgtgcccgctaatgccgccggtcagtttggtcgccagcgcaaggcttaccctacc
tctttgattcttgcccctacccgtgagcttgtgtctcagatctttgacgagtcccgcaag
ttcgcctaccgttcttgggttcgaccttgtgtcgtttacggtggtgccgacattggctct
cagctccgacagatcgagcgtggctgtgatctgcttgttgctactcccggtcgattggtg
gacctcatagagcgaggccgcatctccctccagaacatcaagtacctcgtgctcgatgag
gccgatcgcatgctggacatgggtttcgagccccagattcgccgcattgtcgaaggcgag
gacatgccccaggttcaggaccgccagaccctcatgttctcagccacatttccccgcgac
atccagatgcttgcccgcgatttcctcaaggactacatcttcctttccgtcggtcgtgtc
ggttccacctctgagaacattactcagaaggttgagtacgtcgaggatgttgacaagcga
tccgtccttctggacattctccactcccacgccaacggtctcactctaatctttgttgag
accaagcgcatggctgattcgctctccgacttcctcatcaaccagaacttccctgctacc
tccattcacggtgaccgtactcagcgtgagcgtgagcgtgctctcgagttcttccgtaac
ggccgatgccccatcctggttgctaccgctgttgccgctcgaggtctggatatccctcac
gtcactcacgtcatcaactacgatctccctaccgacgtcgacgactacgtccatcgtatt
ggtcgtactggtcgtgccggaaacactggtattgccactgcattcttcaaccgtggcaac
cgcggaattgttcgcgagcttatggacttgctcaaggaagccaaccaagaggtccctgct
ttcctcgagaccattgcccgtgagtcttccttcggtggaggaggccgtggtggtcgctcc
cgtggcggtggtggtcgcggtggcggtgccactcgtgatttccgaaagtttggcggcggc
ggcttcggtggtaacaacaacggcggcggcggtggcttcaacaacgctggatctcagggt
gctggcttcagcgctggtggtggtggtggcgctggctacggcggaggtgctggttacggt
ggcggagctggctacggcggcggtggttacggcaaccccagcggccctggcgctcaatca
tcttggtggtaa
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