Fusarium pseudograminearum: FPSE_11948
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Entry
FPSE_11948 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03420
Nucleotide excision repair
fpu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPSE_11948
03430 Mismatch repair
FPSE_11948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_11948
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPSE_11948
DNA repair and recombination proteins [BR:
fpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPSE_11948
MMR (mismatch excision repair)
Other MMR factors
FPSE_11948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
ADDB_N
HTH_28
bHLH_NCOA
ISG65-75
Motif
Other DBs
NCBI-GeneID:
20370565
NCBI-ProteinID:
XP_009263340
UniProt:
K3V4T5
LinkDB
All DBs
Position
2:1280837..1284351
Genome browser
AA seq
1029 aa
AA seq
DB search
MSSIVQDAILQSLNEAQRRAVTSTASTVAILAGPGSGKTHTLTSRVVWLIQRVGYRPSDV
IVATFTVKAAREMKERIGKTLGEECEKKIVLGTFHSIARRYLSIYGNRIGLDSKFGIADD
GDSRAIIQRICKRLKLNIEPQHAKSWISKEKAKGPDAMAPPPTQKGRKENPELRTCYEEY
QAQLTRSNLLDYDDLLVKCVELLRDHPACVSNVQTVLIDEYQDTNGIQYELMKLFAQAKQ
RITIVGDPDQSIYGWRSAEVKNLFRLLREYPNTDEISLEENYRSSQSILDVSLTVIQQDT
KRYKKVLLPVHTKGARPVLRSLKSSSAEGEWIVSEIKRAVMMFGDMLKFEDVAILLRSAA
LSRHIESALGKAGVAYRMIGGHKFYERKEIKVLIDYLRVVSQPDNNDALARIINVPRRGI
GEATVKALIEEAEQSDMSLWTLILKHCRGNRKAKANIRPKMEQKLNTELIRTITSLQKQA
SEISQSSPVTLVNLIEQLLTHLDFKKYLEEEYTEEHEQRWANVQEFVNLVSDFMKDFGAP
DEDALPEIANLDQVKEDDMLGRFLANVALASDAQNKGDTTEQKSLVTISTIHAAKGLEWP
VVFVPSVYTGSIPHSRSEDTDEERRLLYVAMTRAKALLYLSCPLYGSQGLSSKVELSPFV
APFASKVFAKKGPSFDRAVVEGVAKILGRDAPSEKTVFGKLPPMFSVEDDRFPVDPADHK
NVERIDEEPGRQYSRAPKRQRVSHPTTSYDESDELPWQREYATTMEKSSEFTVAALPGFT
TAGAHRVALDAAAAAAPPPDSSKPGVKKGSTKRGVGQKSMLGWLNQGPNAPKPPPEPQPQ
PQSRSLAQARYESALSRQNSRLPSLPEPQKPLIDPELAKHKLPTARPLAKPNVPKISDGV
PQKAYSCFSSSPPRPPSKMEPEEEKKEAVEEAIPNKPASTLHATTFMSVRPNGGGARKYI
STTSPKRNTVACDSTSSSLMSKWNNLSPRNKRYAKAGLAVVAGIDVCVHYTYWPYIRSWF
SGAEMEGKI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctattgtacaagatgcgattctccaatcgctgaacgaggcgcaacgccgcgct
gtgacttcaaccgcgtcaactgttgcaattctcgccggccctggaagcggcaaaacccat
acccttacatcgcgggtagtatggcttatccagagagttggctaccgcccttccgatgtc
atcgtcgcaacctttaccgtcaaggccgccagggagatgaaggagcgaatcgggaaaaca
ctgggcgaggaatgcgaaaagaagattgtgcttggcacattccactcgatcgctcgaaga
tatctatccatatatgggaaccgaatcgggttggactccaaattcggcatcgcagacgat
ggagactccagagcaattatccagagaatctgcaagaggctgaaactcaatatcgaaccg
caacatgcaaagtcatggatcagcaaagagaaggcgaaaggaccagatgctatggcacca
cctccgacgcagaaaggaagaaaagagaacccggaattgaggacatgttacgaggaatat
caggctcaactcacaagatcaaatttactggactacgacgatctcctggtcaaatgcgtc
gaactacttcgagatcacccggcttgcgtttccaacgttcagactgtccttatcgacgag
taccaagataccaacggcattcaatacgaacttatgaaactcttcgcccaagcaaaacaa
cgaataacgatcgttggcgaccccgatcagagtatctatggctggcgctcagctgaagtc
aaaaacctcttccgactattgcgagaatatcccaatacagacgaaatatcactggaagaa
aattatcgatcttcacagtccatccttgatgtatcacttactgtcattcagcaagacacg
aagcgatacaagaaagttctgctgccggtccacactaagggagcgcgaccggtactcaga
tcattgaaaagctcgtctgctgaaggcgaatggattgtttcagagattaaacgagcggtc
atgatgtttggagacatgctcaagtttgaggatgtcgcaattctcttgagatccgccgcc
ctttccaggcacatcgaatcagccctaggaaaagctggcgtcgcatatcgaatgattgga
ggacacaaattctacgaacgaaaggagatcaaagtgttaatcgactatctccgggtagtc
agccagcctgacaacaatgatgcgctagccaggatcatcaatgtaccccgacgaggcatt
ggagaggcaacagtcaaagcattaatcgaagaagcagagcagtctgacatgagcctttgg
accttgattctgaaacactgcagaggcaatcgcaaagccaaagccaacatcagacctaaa
atggagcaaaagctcaacacagaacttatccgcactattacgagtttacaaaagcaagcc
agcgaaatcagtcagagcagccctgttacgttggtcaatctgatagagcagttattaaca
cacctcgatttcaagaagtacctggaggaagaatatacagaagagcatgaacagcgatgg
gccaacgtccaggaattcgtcaatttggttagcgatttcatgaaagactttggtgcacca
gacgaagatgcacttccggaaatcgccaacttggatcaggtaaaggaggacgatatgctg
ggtcgttttctggccaacgtcgcgctggcgtcggatgcacagaacaagggagatacaaca
gaacagaaatctctggtcacaatctcgacaatacacgctgcgaaggggttggaatggcca
gtggtctttgtgccatccgtctacaccggatcaatacctcactcaagatctgaagacaca
gacgaggaacgacgcctcttgtacgtggcaatgacacgagcgaaagcactgttgtaccta
agctgtccactttacggctcccaggggttgagcagcaaagtcgagctttcaccgttcgta
gcaccgttcgcatccaaggtctttgctaaaaagggcccatcgttcgatcgagcagttgtg
gagggtgttgccaaaattcttggccgagatgccccatctgagaaaacagtctttggaaag
ctcccgcctatgttctcagtcgaggacgataggttccctgtcgatcctgccgaccacaag
aacgtcgaaaggattgatgaagaacctggtcgtcagtactctcgcgcaccgaagcgacaa
cgtgtttcgcatcctaccacttcttatgacgaatcagatgagcttccctggcagagagag
tatgctacgacgatggagaagtcatctgaattcacggtcgctgctttgccaggcttcaca
accgccggggctcatagagttgctcttgatgccgcagcagcagcggcaccaccaccagac
agctcgaagcctggagtgaagaagggatcaaccaaaagaggtgttggccaaaagagtatg
cttggatggctcaaccaagggccaaacgctcctaaacccccaccagagccgcagccgcag
ccgcagagtaggtctcttgcgcaggctcggtatgaatctgctttgtcgcgacagaacagc
aggttaccctcactgcctgaaccacaaaagccgttaattgatcctgaattggcgaaacat
aaattgccaactgcacggcctctggcaaagccaaacgtgcccaagatcagtgacggtgtc
ccgcagaaagcgtattcctgcttttctagctcacctccacgacctccatcgaaaatggaa
cctgaagaagagaagaaggaagccgtagaagaagcaatacctaacaagcctgcctcaact
cttcatgcgacaacgtttatgtcggtcaggccgaatggtggtggcgctcgcaagtacatc
tcaactacatcgcccaaacgaaacactgttgcatgcgacagcacttcgtcgtccctcatg
agcaaatggaacaacctctctcctcggaacaagcgttatgccaaggcaggcctcgcagtt
gtcgctggcattgatgtttgcgtgcactacacctactggccttatattcgaagctggttc
agcggcgcagagatggaaggaaagatttag
DBGET
integrated database retrieval system
