Fusarium pseudograminearum: FPSE_12129
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Entry
FPSE_12129 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FPSE_12129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_12129
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FPSE_12129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
20370746
NCBI-ProteinID:
XP_009263521
UniProt:
K3V3Q6
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All DBs
Position
2:complement(<7149840..>7150998)
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AA seq
328 aa
AA seq
DB search
MDIDEDDDLYQPEEPKLESAPIEDNKPKTDDLEEGEEEDEGAAMDEDDDDDDDSDIDIIT
ERKDGTKPAPPQQSKYSDIRNIPQRTASNDMPAQPAPVKKESESRASVNVAAPSADKTSA
AASKSTIDVNVNPIHPGTGKPITQVNIDEDLPENDKPWRKPGTDISDYFNYGFDEFTWAL
YASKQDTVRGEFGADVFAQNNKKMMEDFNMMMMGGMGMPGGGNSGGQQAGMSGGMDGMPP
EMQAMMQQMMASGMDPSQMDPSQMNAMFSGMQNAGGAGGQGAQGGQGGNFGGGFGNNQGG
FGYDQNMSGGGGGGGRGGFGGRGRRGRW
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacgaagatgatgatctctaccagcccgaagagcccaagctcgaaagcgca
cctatcgaggataacaaacccaagacagacgacttagaggaaggtgaagaagaggacgag
ggcgcggccatggacgaggacgacgatgacgatgatgactctgatatcgatattatcaca
gagcgcaaagacggcacgaaaccagctcctccacaacagtccaaatatagcgatattcga
aatattccccaaagaacggcttcaaacgatatgccagcacaaccagcaccggtgaagaag
gaatcagaatcacgggcttcagtcaatgttgctgcacccagcgctgataaaacttcggcc
gcggcctcgaaatcgacgatcgatgtgaacgtaaaccctatccatcctggtacaggaaag
cctatcactcaagtcaacattgatgaagaccttccagagaacgacaagccatggcggaaa
cccggtacggatattagcgactatttcaactacggcttcgacgaattcacatgggcgctc
tacgcctcaaagcaggatactgttagaggcgagtttggagcagatgtcttcgcacagaac
aacaagaagatgatggaagacttcaacatgatgatgatgggtggcatgggtatgccaggt
ggcggcaactcgggaggccagcaagcgggcatgtctggcggcatggatggtatgcctcct
gagatgcaagcaatgatgcagcagatgatggcctcgggcatggacccaagccaaatggac
cccagtcagatgaacgccatgttctccggcatgcaaaatgctggaggagcaggtggccag
ggcgcacagggcggccaaggtggcaattttggcggcggctttggtaacaaccagggcggt
tttggatacgatcaaaacatgtctggaggaggcggcggtggtggccgaggcggatttgga
ggtcgcggacgccgtgggcgatggtag
DBGET
integrated database retrieval system