Franconibacter pulveris: ACBV55_00740
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Entry
ACBV55_00740 CDS
T10797
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fpul Franconibacter pulveris
Pathway
fpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBV55_00740 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpul03021
]
ACBV55_00740 (rho)
03019 Messenger RNA biogenesis [BR:
fpul03019
]
ACBV55_00740 (rho)
Transcription machinery [BR:
fpul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACBV55_00740 (rho)
Messenger RNA biogenesis [BR:
fpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACBV55_00740 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XES84452
LinkDB
All DBs
Position
160707..161966
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacattattttcgccatcctgaaa
cagcacgcgaagagtggcgaagatatttttggcgacggtgtgctggagatattgcaggat
ggattcggtttcctccgctccgcagacagctcctacctcgccggtcctgacgacatctac
gtatctcccagccaaatccgccgtttcaacctccgcacaggggacaccatctccggtaag
attcgaccgccaaaagaaggcgagcgttactttgcactgctgaaggtgaacgaggttaac
ttcgataagccggaaaacgcgcgcaacaagatcctgttcgaaaacttaacgccgctgcat
gcgaactcccgtctgcgtatggagcgcggcaacggctccaccgaagatttaaccgctcgc
gtgctggaccttgcttctccgattggccgcggtcagcgtggtctgattgtagcgccgccg
aaagcgggtaaaaccatgctgctgcagaacattgcgcagagcatcgcttataaccatccg
gattgcgtgctgatggtgctgcttatcgacgagcgcccggaagaagtgaccgagatgcag
cgtctggttaaaggcgaagtggttgcttccaccttcgacgagccggcatcccgccacgtt
caggttgccgaaatggtcatcgagaaggccaagcgtctggtagagcataaaaaagacgtt
atcattctgctggactccattacccgtctggcgcgcgcctacaacaccgttgtgccggca
tccggcaaagtgttgaccggtggtgttgacgcgaacgccctgcatcgtccgaagcgtttc
ttcggcgccgcgcgtaacgtggaagagggcggcagcctgaccattattgcgactgctctg
attgatactggctccaaaatggacgaagttatctacgaagagtttaaaggcaccggcaac
atggaattgcacctgtcccgtaagattgcggaaaaacgtgtattcccggccattgattac
aaccgctccggcacccgtaaagaagagttgctgactactcaggaagagttgcagaagatg
tggatccttcgcaaaatcattcacccgatgggtgaaatcgacgcgatggaattcctcatt
aacaagctggcgatgaccaaaacgaacgatgagttttttgatatgatgaagcgctcgtaa
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