Franconibacter pulveris: ACBV55_00915
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Entry
ACBV55_00915 CDS
T10797
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fpul Franconibacter pulveris
Pathway
fpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBV55_00915 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpul03019
]
ACBV55_00915 (recQ)
03400 DNA repair and recombination proteins [BR:
fpul03400
]
ACBV55_00915 (recQ)
Enzymes [BR:
fpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACBV55_00915 (recQ)
Messenger RNA biogenesis [BR:
fpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACBV55_00915 (recQ)
DNA repair and recombination proteins [BR:
fpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACBV55_00915 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF6972
Motif
Other DBs
NCBI-ProteinID:
XES84481
LinkDB
All DBs
Position
194899..196725
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AA seq
608 aa
AA seq
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MAQAEVYNQESLAKQVLQETFGYQQFRPGQETIINTVLEGRDCLVVMPTGGGKSLCYQIP
ALVKEGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDQQLEVIAGCRTGQVRLLY
IAPERLMMDNFIDQISRWPLSMIAVDEAHCISQWGHDFRPEYAALGQLRQHLPQVPFIAL
TATADDTTRLDIVRLLGLQDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAGAYHAGLEPQVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRKCLEEKQPGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCGNCDICLDPPRRYDGLLDAQKAL
STIARVNQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSHEHWVSVIRQLIHLG
VVTQNIAAHSALQLTEAARPFLRGEAPLMLAVPRVAALKPRVAQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGREFMALIR
SHVDGDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtttataatcaggaatcgctggcgaagcaggttttacaagaaacc
ttcggctatcagcagtttcgcccgggccaggaaaccatcatcaacacggtgctggaaggt
cgcgattgcctggtggtgatgcccacaggcggcggtaaatcgctgtgctatcagatcccc
gcgctggtgaaagaggggctgaccgtcgtcgtctctccgcttatctcgctgatgaaagac
caggtcgaccagctgctcgccaacggcgtggcggccgcctgtcttaactcaacccaaagc
cgcgatcagcagcttgaggttattgctggctgtcgtaccggccaggttcgcctgctttat
atcgcgccagagcggctgatgatggataacttcatcgaccagattagccgctggccgctc
tctatgattgccgtggacgaagcgcactgtatttcccagtgggggcacgatttccgcccg
gaatatgcggcgctcggccagttgcgccagcatctgccgcaggtgccgtttatcgctctg
accgccacggctgacgacaccacgcgccttgatatcgtgcgtctgctcggcctgcaggac
ccgctgattcaaatcagcagctttgaccggccgaatatccgttacatgctgatggagaaa
ttcaagccgctcgaccagcttatgcgctacgtgcaggagcagcgaggcaagtcaggcatt
atctactgcaacagccgcgcaaaggtggaagacaccgctgcgcgcctgcaaagcaaaggc
atcagcgcaggggcgtaccacgccgggctggagccgcaggttcgcgccgaggtgcaggag
aaattccagcgcgacgatttgcaaatcgtggtggcgacggtcgcgttcggtatgggcatc
aacaagcccaacgtgcgctttgtggtgcacttcgacattccgcgtaatatcgagtcttat
tatcaggaaaccgggcgcgccgggcgcgacggcctgcccgccgaagcgatgctgttttac
gacccggcggacatggcctggctgcgcaaatgccttgaagaaaaacagcccgggcagctg
caggatattgagcgccataagctcaacgccatgggcgccttcgctgaagcgcaaacctgc
cgccgtctggtgctgcttaactatttcggcgaagggcgccagcagccctgcggcaactgc
gatatctgcctcgacccgccgcgccgttacgacggcctgctggacgcgcaaaaggcgctc
tcgacgattgcgcgcgttaaccagcgcttcggtatggggtatgtggtggaagtgctgcgc
ggggcgaacaaccagcgcattcgcgaactggggcacgacaagctgaaggtgtacggtatt
ggccgcgatcagagccatgagcactgggtcagcgttatccgccagcttattcatctcggc
gtagtgacgcaaaacatcgccgcgcactccgcgctgcaacttactgaagcggcgcgtccg
tttctgcgcggtgaagcgccgctgatgctggcggtgccgcgcgtcgccgcccttaaaccg
cgcgtggcgcagaaatcttacggcggcaactatgaccgcaagctattcgctaaactgcgc
aagctgcgtaaagccatcgccgatgaagagaatattccgccttacgtggtgttcaacgac
gccacgctgatagaaatggcggagcagatgccgcttagccctggcgaaatgctgggcatc
aacggcgtgggcacccgcaagctggagcgttttggccgcgaatttatggcgcttatccgc
agccatgtcgacggcgacgatgagtaa
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