| Entry |
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| Symbol |
hrpB
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| Name |
(GenBank) ATP-dependent helicase HrpB
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| KO |
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| Organism |
fpul Franconibacter pulveris
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| Brite |
Enzymes [BR:fpul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACBV55_03700 (hrpB)
Messenger RNA biogenesis [BR:fpul03019]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACBV55_03700 (hrpB)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
793496..795925
|
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| AA seq |
809 aa
MSSLPVAAVLPELLTALQHAPQTLLIAPTGAGKSTWLPLQILQKGELSGRILLLEPRRLA
ARNVAQRLAELLGEACGETVGYRMRAETCVGPNTRLEVVTEGILTRLIQRDPELNGVSLV
ILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDNARLQQLLPQAPVIVSEGRA
FAVERRYQALSAHQRFDDAVAQAVSGLLREERGSLLLFLPGVGEIQRVQEQLAERVASDV
LLCPLYGALPLSEQRKAILPAPPGFRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDA
RTGLTRLVTQRVSQASMTQRAGRAGRLEEGICLHLIGKEQAERAAAQGEPEILQSDLAGL
LLELLQWGCRDVSELSWLDTPPAANLQAARALLSQLGALENNALTARGRQMAQLGNDPRL
AAMLVGAGDADEQATAARLAALLEEPPRGRESDLRGAFARNQSNWQARSNQLLKRLKSSG
GRGDISLAAGLLAQAFSDRIARRRGLDGRYQLANGMGAMLDQDDALSRYEWLIAPLLLQG
GNTPDARILLALPFDLDALIADYPHLLQQSDSVEWDEAQGTLKAFRRWRLGQLVVKTQPL
SKPSEEELHQAMLNGIREKGLSVLNWTPEAEQLRLRLACAARWLPEHPWPAVDDEALLAS
LEKWLLPEMNGVHSLRALKNLNLTVALNHLLEWSLRQRLDSALPTHYTVPTGSRKAIRYD
ADNPPALAVRMQEMFGEAATPVIAQGRVPLTLELLSPAQRPLQITRDLAAFWRGAYREVQ
KEMKGRYPKHVWPDDPANAQPTRRTKKYS |
|---|
| NT seq |
2430 nt +upstreamnt +downstreamnt
gtgtcgtcattgccggtcgccgccgtactgcctgaacttctcaccgccctgcaacacgcc
ccgcagaccctgcttatcgcccccaccggcgccgggaaatcgacctggctgccgctgcaa
attttacaaaagggcgagttgagcgggcgcattctgctgctggagccgcgcaggctggcg
gcgcgcaacgtggcgcagcggcttgccgaactgctgggcgaggcgtgcggcgaaacggta
ggctaccgcatgcgcgctgaaacgtgcgtcgggccgaatacgcgccttgaggtggtgacg
gaaggcattcttacccggcttatccagcgcgacccggagcttaacggcgtttcactggtg
atccttgatgaattccatgagcgaagcctgcaggcggacctcgcgcttgcgctgctgctg
gacgtgcagcaggggctgcgcgacgatctcaggctgctgattatgtcggcgacgctggac
aacgcgcggctgcaacagctgctcccccaggcgccggtgatcgtgtccgagggccgggcg
tttgccgttgagcgccgttaccaggcgctcagcgcccaccagcgcttcgacgacgcggta
gcgcaggcggtgagcgggctgctgcgagaagaacgcggctcgctgctgctctttttgcca
ggcgtgggcgagatccagcgcgtgcaggagcaactggccgaacgcgttgcctccgatgtg
ctcctctgtccgctctacggcgcgctgccgctgagtgaacagcgcaaagcgattctgccc
gcgccgccgggctttcgcaaagtggtgctggcgaccaatatcgccgagaccagtcttacc
attgagggcattcgtctggtggtggacagcgcccaggagcgcgtggcgcgcttcgatgcc
cgtaccggcttaacgcggctggtgacgcagcgggtaagccaggcttccatgacccagcgc
gcaggccgcgccgggcgtctggaagagggcatctgcctgcatcttatcggcaaagagcag
gcggagcgcgcggcggcgcagggcgaaccggagatcctgcaaagcgatctcgccggtctg
ctgctggagctgttgcagtggggatgccgggatgtcagcgagcttagctggctcgatacg
ccgcctgcggctaaccttcaggcggcgcgggcgctgctaagccaactgggcgcgctggag
aacaacgcgcttacggcgcgcggacgtcagatggcgcagcttggcaacgacccgcgtctg
gccgcgatgctggtcggcgcaggcgatgcggacgagcaggccactgccgcccgtctcgcc
gcgctgctggaagagccgccgcgcggcagggaaagcgatctgcgcggcgcctttgcccgc
aaccagagcaactggcaggcgcgcagcaaccaactgcttaagcgattaaaatcgtccggc
ggtagaggcgatatttcgctggccgccgggctgctggcgcaggcgtttagcgatcgcatc
gcccgccgccgtgggctggatggccgttatcagctcgccaacggcatgggggcgatgctc
gatcaggacgatgcgctctcccgctacgagtggcttatcgcgccgctgctgttgcagggc
ggcaacacgccagacgcgcgtatattgctggcgctgccgttcgacctcgacgcgcttatc
gctgactatcctcacctgttgcagcagagcgattcggtggaatgggacgaagcacagggg
acgctgaaggcgtttcgccgctggcggcttgggcaactggtggtcaagacgcagccgctg
tcgaaaccctcagaagaagagctacaccaggcgatgcttaacggcattcgcgaaaaaggg
ctttcggtgcttaactggacgccggaagcagaacagctgcgtttgcgtctggcctgcgct
gcccgctggctgccagagcatccatggcctgcggtggatgacgaggcgctgctggcctcg
cttgagaaatggctgctgccggagatgaacggcgtgcattcgctgcgggcgctaaaaaac
ctgaaccttacggtggcgcttaaccatctgctggagtggtcattacgtcaacggctggat
agtgcattgccaactcattacactgtgccgaccggaagccggaaagccattcgttatgac
gccgataacccgcctgcgctggcggtgcggatgcaggagatgtttggcgaagctgcaaca
ccggttattgcacaggggcgggtgcccctgacgctggagctgctttcgcccgcccagcgg
ccgttgcagataacccgcgacctggccgccttctggcgcggcgcttaccgggaagtgcaa
aaagagatgaagggacgctacccgaaacacgtctggccggacgacccggccaatgcgcaa
cccacgcgccgcacgaagaagtattcgtaa |
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