Franconibacter pulveris: ACBV55_03865
Help
Entry
ACBV55_03865 CDS
T10797
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpul Franconibacter pulveris
Pathway
fpul03030
DNA replication
fpul03430
Mismatch repair
fpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACBV55_03865 (dnaE)
03430 Mismatch repair
ACBV55_03865 (dnaE)
03440 Homologous recombination
ACBV55_03865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpul03032
]
ACBV55_03865 (dnaE)
03400 DNA repair and recombination proteins [BR:
fpul03400
]
ACBV55_03865 (dnaE)
Enzymes [BR:
fpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACBV55_03865 (dnaE)
DNA replication proteins [BR:
fpul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACBV55_03865 (dnaE)
DNA repair and recombination proteins [BR:
fpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACBV55_03865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XES85022
LinkDB
All DBs
Position
834002..837484
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGV
GMKPIIGADFNVQSELLGDEFTHLTVLAANNTGYQNLTLLISRAYQRGYGPAGPWIDREW
LAELNEGLILLSGGRMGDVGKSLLRGNGALVDQCVEFYQHYFADRYYLELVRTGRADEEN
YLHAAVRLAEEKGLPVVATNDVRFIDPSDFDAHEIRVAIHDGFTLDDPKRPRFYSTQQYM
RTEEEMCELFADIPEALENSVEIARRCNVTVRLGEYFLPQFPTGDMTTEDFLVKKSKEGL
EDRLEFLFPDPAVRAEKRREYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LQEIYDADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEMGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALDMINARRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKDGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVTTAAGLVISARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttgtgcacctgcgggtgcacagtgactattccatgatcgacgga
ctggcaaagacggggccgctggtaaaaaaggcggccgcgctcggcatgcctgcgctggcc
ataactgacttcactaacctttgcgggctggtaaagttttacggcggcgcgcacggcgta
gggatgaaaccgataatcggcgctgattttaacgtccagagcgagctgttgggtgatgaa
ttcacccacctgactgtccttgccgcgaacaataccggttatcagaacctgacactgctt
atctccagagcctatcagcgtggttacggccccgctggcccgtggatcgaccgcgaatgg
ctggctgagctgaatgagggcttgatcctgctctcaggcggcagaatgggcgatgtaggc
aaaagcctgttgcgcggcaatggcgcgctggtggatcagtgcgtggagttctatcagcac
tatttcgccgatcgttactacctggagctggtgcgcaccgggcgtgcggatgaagaaaac
tacctgcacgccgccgtccggctggcggaagagaaaggattgccggttgtcgctaccaat
gacgtacggtttatcgacccttctgacttcgacgcgcatgaaatccgcgtcgccatccat
gatggctttacgctggatgaccctaaacgcccgcgcttctactccacgcagcagtacatg
cgtacagaagaggagatgtgcgagctctttgccgatatcccggaggcgctggaaaacagc
gtagagatagcccgtcgctgtaatgtcaccgtgcgccttggcgaatacttcctgccgcag
ttcccgaccggtgatatgaccaccgaagattttctggtgaagaaatcgaaggagggtctg
gaagatcgactggaatttttgttccccgacccggcggtacgcgccgagaagcgtcgggaa
tatgatgaacgcctggacattgaacttcaggttatcaaccagatgggctttccgggctac
ttccttatcgtaatggagtttatccagtggtcgaaggataacggcattccggtagggcca
ggccgtggttccggtgcgggctcgcttgtggcctacgcgctaaagattaccgacctcgat
ccgctggaattcgacctgctgtttgagcgtttccttaaccctgaacgtgtctcaatgcct
gactttgacgtcgacttctgcatggagaagcgcgaccaggtgattgaacacgtggcggat
atgtacgggcgcgacgcggtatcgcaaatcatcaccttcggcaccatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgttaggccacccgtatggctttgttgaccgcatctcc
aagcttattcctcccgatccgggtatgacgcttgccaaagcgttcgaggcggagccgcag
ctgcaggagatttatgatgccgatgaagaggttaaagcgctcatcgacatggcgcgcaag
cttgaaggggtgacgcgtaacgccggtaagcacgccggcggcgtggttatcgcgccgact
aaaattaccgattttgcgccgctttactgcgacgaaatggggcatcatccggttacccag
tttgataaaaacgatgtggaatacgctgggctggtgaagtttgacttcctcgggctgcgt
acgcttaccatcatcaactgggcgctggatatgattaacgcccgccgcgcgaagcagggc
cttgagcccatcgatatcgccgccattccgctggacgataaaaaaagcttcgacatgctg
cagcgctcggaaaccactgcggtgttccagcttgaatcccgcggcatgaaagacctgatt
aagcgcctgcagcctgactgcttcgaagatatgatcgcgctcgtggcgctcttccgtccg
ggcccgctgcagtccggcatggtggataactttatcgaccgtaagcacgggcgtgaggct
atctcttatcctgatattcagtggcagcatgaaagcctgaaacctgtactggagccgacc
tacggcatcatcctttatcaggaacaggtcatgcagatagcccaggtgctttcggggtat
acgctgggcggcgcggatatgctgcgccgtgcgatgggtaagaaaaagcctgaagagatg
gctaagcagcgttctatctttgaagacggcgcgaagaaaaacggcgttgacggcgagctg
gcgatgaaaatctttgacctcgttgagaaattcgcgggttacggatttaacaagtcgcac
tcggcagcctatgcgctggtttcttaccagacgctgtggctcaaggcgcactatccggca
gagtttatggcggcggtaatgaccgcggacatggacaacaccgataaggttgtcggtctg
gtggacgagtgctggcgcatggggctgaaagtcctgccgccggatattaactccgggctt
taccagttccacgtgaacgacgacggtgaaatcgtttacggcatcggcgcgattaaaggc
gtgggcgaaggcccgattgaagcgattattgaagcgcgcaacaaagacggctatttccgc
gagctgtttgacctctgcgcccgtacggacaccaaaaagctgaaccgccgcgtgctggag
aagctgattatgtccggcgcgttcgatcgtctggggccgcaccgcgcggcgctaatgaat
tcgctgggcgacgcgctgaaagccgccgatcagcatgccaaagccgaagccatcggccag
gcggatatgttcggcgtgctggcggaagagccggagcagatagagcaatcctacgccagc
tgtcagccgtggccggagcaggtggtgctggatggcgagcgtgaaacgctggggctgtac
ttaactggccaccccatcaaccagtatctgaaagaaattgagcgttatgtcggcggcatg
aggcttaaagatatgcatccgaccgaacgtggcaaagtgaccacggcggcggggcttgtg
atttccgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttcagggcgtctggaggtgatgttgttcaccgacgcgctggagaaataccagcag
ttgctggagaaagaccgaatcctgatcgttagcggacaggtcagctttgatgacttcagc
ggagggcttaaaatgaccgcccgcgaagtcatggacattgacgaagcccgcgaaaagtat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccagtacatctctactatcag
agggcggacgcccgtgcgcggttgcgtttcggcgcgacgtggcgtgtctcgccaagcgat
cgtttacttaacgatctgcgtggcctgattggttcggagcaggtggaactggaatttgac
tga
DBGET
integrated database retrieval system
