Franconibacter pulveris: ACBV55_09955
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Entry
ACBV55_09955 CDS
T10797
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpul Franconibacter pulveris
Brite
KEGG Orthology (KO) [BR:
fpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpul03032
]
ACBV55_09955 (topA)
03400 DNA repair and recombination proteins [BR:
fpul03400
]
ACBV55_09955 (topA)
Enzymes [BR:
fpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACBV55_09955 (topA)
DNA replication proteins [BR:
fpul03032
]
Prokaryotic type
DNA Topoisomerases
ACBV55_09955 (topA)
DNA repair and recombination proteins [BR:
fpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACBV55_09955 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Motif
Other DBs
NCBI-ProteinID:
XES86488
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Position
2092419..2095019
Genome browser
AA seq
866 aa
AA seq
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MGKALVIVESPAKAKTINKYLGKDYVVKSSVGHIRDLPTSGSAPKKSADSASTKKAAGKA
KKDERGALVSRMGIDPWHNWEAQYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAI
AWHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNLDRVNAQQARRFMDRVVGYMV
SPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASLTTPSSEALSVQVT
HQHDKPFRPVSRDETMAAVELLKGAQYKVIEREDKPTSSKPGAPFITSTLQQAASTRLGF
GVKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIDSNFGKKYLPDAPNQYASKE
NSQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGD
FRLKARGRTLRFDGWTKVMPALRKNDEDRTLPAVNEGDTLSLIELTPAQHFTKPPARFSE
ASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMN
YDFTAQMEDSLDRVANHEAEWRGVLDSFFNDFNKQLDTAEKDPEEGGMRPNQMVLTSIDC
PTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAR
RRCVKCGTAMDSYLIDPKRKIHICGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMH
LKMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGV
FLAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQEDPEGNKTMVRFSRKTKQQY
VASEKDGKATNWSAFYVDGKWVEGKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgattaacaaatat
ctcggtaaagactacgtggtgaaatccagcgtaggccacatccgtgatttgccgaccagt
ggctccgcccctaagaaaagcgctgactccgcctccaccaaaaaagcggccggcaaggcc
aaaaaagatgaacgtggtgcgctcgtcagccgtatgggcatcgacccctggcacaactgg
gaagcacagtatgaagtgctgccgggtaaagaaaaggtggtttccgagctcaagtcgctc
gcggaaaaagccgatcatatctatctcgcaaccgaccttgaccgcgaaggggaggctatc
gcctggcacctgcgggaagtgatcggcggcgatgacaaacgctacagccgcgttgtcttc
aacgaaattaccaagaacgccattcgtcaggcatttgaaaagccgggcgaattgaatctc
gatcgcgtaaacgcccagcaggcgcgccgcttcatggaccgcgtggtgggctatatggtt
tccccgctgctgtggaagaaaatagcgcgtgggctttctgcaggccgcgttcagtcagtc
gcggtgcgtttagtggtagagcgcgagcgcgaaattaaggcgtttgttccggaagagtat
tgggaagttgacgcctcgcttaccacgccttccagcgaagcgctgtctgtccaggttacg
catcagcatgacaagccattccgccctgtcagccgcgatgaaaccatggcggcggtggag
ctgcttaagggcgcgcaatataaagttatagagcgtgaagacaaacccaccagcagcaag
cctggtgctccctttattacgtctaccctgcaacaggcagcaagcacgcgtcttggtttt
ggcgtgaagaaaaccatgatgatggcgcagcgtctctatgaagccgggcacattacctat
atgcgtactgactccaccaacctgagtcaggatgcggtgagcatggttcgcggctacatt
gacagcaacttcggtaaaaaatatctgccggacgcgccgaaccagtacgccagtaaagaa
aactcccaggaagcgcacgaagccattcgtccttccgatgtgagcgtgcttgcggaatcg
ttgaaggatatggaagcggacgcgcagaagctctatcagcttatttggcgccagttcgtg
gcctgccagatgacgcctgcgcagtatgattccactacgctcacggtagcggcaggcgat
ttccgcctcaaagcgcgcggacgcaccttgcgcttcgacggctggacgaaagtcatgccg
gcgctgcgtaaaaacgatgaagatcgcacgctgccagcggtaaacgaaggcgatacgctt
tcattaatcgaattgacaccggctcagcactttaccaagccgccggcacgctttagcgaa
gcctcgctggttaaagagcttgagaagcgcggaattggccgcccgtctacttatgcgtcc
attatctccactattcaggaccgtggttacgtgcgtgtggaaaaccgccgtttctatgct
gaaaaaatgggtgaaatcgtcaccgaccgcctggaagaaaatttccgcgatttgatgaat
tatgatttcaccgcgcagatggaagacagccttgaccgggtagcgaaccatgaagctgaa
tggcgcggcgttctggacagcttctttaacgattttaacaagcagcttgatacggctgag
aaagatccggaagagggcggcatgcgcccgaaccagatggtgttgaccagcatcgactgt
ccgacctgcgggcgcaagatggggattcgcaccgccagcactggcgtattcctcggctgt
tccggctatgcgctgccgccgaaagaacgctgcaaaaccaccatcaatcttgtgccggaa
aatgaagtgctgaacgtgctggaaggtgacgatgcggaaaccaacgcgcttcgcgcgcgc
cgtcgttgcgtcaaatgcggcacggcgatggacagctacctcatcgacccgaaacgtaag
attcatatctgcggtaataaccctacctgcgacggttatgagattgaggaaggcgagttc
cgcatcaaaggctacgatggcccggtggtggagtgcgagaagtgcggttctgaaatgcac
ctgaaaatgggacgttttggcaagtacatggcttgtaccaatgaagagtgcaaaaacacc
cgtaaaattctgcgtaacggtgaagtcgcgccgccgaaggaggacccggtgccgctgcct
gagttgccgtgcgagaaatcagacgcttactttgttcttcgcgatggcgcggcaggggtt
ttccttgcagcgaacaccttcccgaaatcacgtgaaacgcgcgcgccgctggtcgaagag
ttacatcgcttccgcgatcgtctgccggaaaaactgcgctatctcgctgacgcgccgcag
gaagaccctgaaggcaacaaaacgatggtgcgttttagccgtaagaccaaacagcaatat
gttgcgtctgaaaaggatggcaaggcgactaactggtctgccttttacgtcgacggcaaa
tgggtcgaaggtaagaaataa
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