Franconibacter pulveris: ACBV55_20085
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Entry
ACBV55_20085 CDS
T10797
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpul Franconibacter pulveris
Brite
KEGG Orthology (KO) [BR:
fpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpul03016
]
ACBV55_20085 (truB)
Enzymes [BR:
fpul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACBV55_20085 (truB)
Transfer RNA biogenesis [BR:
fpul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACBV55_20085 (truB)
Prokaryotic type
ACBV55_20085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
XES83810
LinkDB
All DBs
Position
complement(4224628..4225572)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVVEVRPVTFRDEQLASALESFRGDTM
QVPTMFSALKYQGKPLYEYARQGIEVPREPRPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPIDRMVTLEQLKALVEQAEAQGAPASELLDPL
LMPMDSPAADYPVVNIPLTSAVYFKNGNPVHTTGAPQEGLVRVTEGEEGKFLGMGEIDAE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgtgatattcatggcgtgttattgctggataagccg
caggggctctcctccaatgacgcgttgcaaaaagtaaagcgcatctataacgccaaccgc
gccgggcatactggcgcgctggatccgctggcgactggcatgctgccgatttgcctcgga
gaggcgacgaagttttcccagtatctgctcgattcagataagcgttatcgcgttatcgct
cgccttggacagcgtaccgatacctctgatgctgatggcaacgtggtggaagtgcgaccg
gtaacgttccgcgatgaacaactcgccagcgcgctggaaagctttcgtggcgatacgatg
caagtacccactatgttttcggcgctaaaataccagggcaagccgctttacgaatatgcg
cgtcagggcatagaagtgccgcgcgagccgcgtccgattaccgtctatgagctgctgttt
atccgtcacgaaggggatgagctggagctggaagtgcattgttcgaagggtacttacatt
cgtacaatcattgatgatcttggcgaaaagctcggctgcggcgcgcatgtgatttttctg
cgccgcctggccgtaagcaaatatccgatagatcggatggttacgctcgagcaactgaaa
gcgctggtcgagcaggcagaggcgcagggggctccagcttccgaactgttggacccgctg
ctgatgccgatggacagtcctgctgccgattatccggtagtaaacatcccgttaacgtca
gctgtttactttaaaaatggtaatccggtacatacaacgggcgcgccgcaggaaggtctg
gtacgtgtaaccgaaggcgaggaaggtaagttcctcggcatgggtgaaattgacgctgaa
ggccgtgtagcgccgcgccgtctggtggttgaatatccggcgtag
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