Flavobacterium psychrophilum V3-5: IA03_01380
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Entry
IA03_01380 CDS
T03659
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Pathway
fpv03030
DNA replication
fpv03410
Base excision repair
fpv03420
Nucleotide excision repair
fpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IA03_01380
03410 Base excision repair
IA03_01380
03420 Nucleotide excision repair
IA03_01380
03440 Homologous recombination
IA03_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpv03032
]
IA03_01380
03400 DNA repair and recombination proteins [BR:
fpv03400
]
IA03_01380
Enzymes [BR:
fpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IA03_01380
DNA replication proteins [BR:
fpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IA03_01380
DNA repair and recombination proteins [BR:
fpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IA03_01380
NER (nucleotide excision repair)
GGR (global genome repair) factors
IA03_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIG29212
UniProt:
A0A076NWX0
LinkDB
All DBs
Position
complement(312143..314989)
Genome browser
AA seq
948 aa
AA seq
DB search
MSQKRLYLLDAYALIFRGYFAFIKNPRINSKGMDTSAIMGFMNALMDVIKREKPDHLAVA
FDKGGSTYRYEMYQEYKAHRDETPEAIKIAVPYIQDLLKAMHIPIIEVAGFEADDLIGTL
AKQAEKEDFKVYMVTPDKDFAQLVSENIFMYKPARMGNDIEIWGVPEVLAKFEIERPEQV
IDFLGMMGDAADNIPGLPGVGEKTAKKFLKEYGSIENLLANTHQLKGAIKDKIEANKEKG
ILSKKLATILLDCPVTFNASTYELSKPDVEKTDELFQELEFRQMKTQFDKYFGTGKDYDE
IDTNENDNSQIQKKTVAKKTNEDQFDLFGFSDQESGEIKTDSHYAKLENTEHFYQSIEGD
FAVKLLLQNLLNQTSVCFDTETTGIDALNAQLVGMSFSFEKGKAFYVPFPENQEDAQVLA
DKFKPFFESESIEKIGQNIKYDLKILSHYGVQIKGKLFDTMIAHYLINPDMRHNMDVLSE
TYLKYSPKSIEDLIGKKGKNQKSMRDVSLEEIKEYAAEDADITYQLKQNFSPILDKAETK
KLFEEIEIPLIPVLAAMELEGINLDVPFLKSMSAEMALESNALEQKIYETAGEKFNLASP
KQLGDVLFDKMKIGGAKQKKTKTGQYATGEEILSYLANDNPIVKDILEWRQMVKLQSTYI
DALPNQVDKKTGRVHTDYMQTVAATGRLSSNNPNLQNIPVRTERGRLIRKAFIPRNENYT
LISADYSQIELRIIAALSGEENMIAAFQNNQDIHKSTAAKVFNVALEDVTKEQRSNAKTV
NFGIIYGVSAFGLSNQTSLSRKESAELIDAYYATYPKLKSYMSNQVDFARENGYVQTVLG
RRRYLKDINSANMMVKSGAERNAVNAPIQGSAADIIKIAMINIHKKLTQENWQSKMLLQV
HDELVFDVHNSELEKIQPMIKYEMENAFKIDVPLDVEIGIGKNWLEAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgcctttaccttctagatgcttacgctttaatatttcgtggttatttt
gcctttataaaaaacccaagaattaactcaaaaggcatggatacctctgccattatgggc
tttatgaatgccttaatggatgttataaaacgggaaaaaccagaccatttagccgtagct
ttcgacaaaggcggcagcacctaccgatacgaaatgtaccaagaatacaaagcgcatcga
gacgaaacgcccgaagccataaaaattgccgttccgtacatacaagatttactaaaagcc
atgcacattcctattattgaagtggcaggttttgaagcagatgatttaataggtacctta
gcaaaacaagccgaaaaagaagattttaaagtatatatggttacgccagataaggatttt
gcacaattggtttcagaaaatatttttatgtacaaacccgcgcgtatgggtaacgacata
gaaatttggggagttccagaagttttagcaaaattcgaaatagaaagacctgaacaagtt
attgattttctaggaatgatgggcgatgccgccgataacattccaggattaccaggtgtt
ggcgaaaaaacagcaaaaaaattcctaaaagaatacggatcgatagaaaaccttttagcc
aatacacaccaattaaaaggagccattaaagacaaaattgaagccaataaagaaaaagga
atcttatctaagaaactcgctacaatattactagattgtcctgtaaccttcaacgcttct
acttacgaattatctaaacctgatgtcgaaaaaacagacgaactgtttcaagaattagaa
tttaggcaaatgaaaacacagtttgacaaatattttggaacaggaaaagattatgacgaa
attgacactaatgaaaatgacaatagtcaaattcagaaaaaaactgtggctaaaaaaacc
aacgaagaccaattcgatttatttggtttttcggaccaagaaagtggcgaaataaaaaca
gactctcattatgcaaaattagaaaacacagaacatttttaccaaagtattgaaggcgat
tttgctgtaaaattactacttcaaaacctactcaatcaaacttcagtatgtttcgatact
gagactaccggaattgatgccttaaatgcccaattggttggaatgtcattttctttcgaa
aaaggaaaagctttttatgttccttttccagaaaaccaagaagacgcacaagttttggca
gacaaatttaaaccttttttcgaaagtgaaagcatcgagaaaattggtcaaaacatcaaa
tatgatttaaaaatcctttcgcattacggagttcaaatcaaaggaaaattattcgatacc
atgattgcacattatctgattaatccagatatgcgtcataatatggatgttttaagtgaa
acctatttaaaatattcgccaaaatcgattgaagatttaattggcaaaaaaggcaaaaat
caaaaatcgatgcgtgacgtttctttagaagaaattaaagaatacgctgccgaagatgct
gatattacctatcagttgaaacaaaattttagtccaattcttgacaaagcagaaaccaaa
aaactttttgaagaaatagaaattccgctaattcctgttttggcagccatggaattagaa
ggaattaatctcgacgttccgtttttaaaatcgatgtcggcagaaatggccctcgaaagc
aatgcgctagaacaaaaaatatacgaaaccgcaggggagaaatttaatttggcttcaccc
aaacaactcggcgatgttttatttgacaagatgaaaattggcggagcaaaacaaaagaaa
accaaaacagggcaatatgccactggcgaagaaattttaagctatttagccaatgacaat
ccaattgtaaaagacattttagaatggcgccaaatggtaaaattacaaagcacttatatt
gatgccttacccaaccaagtagataaaaaaacaggacgtgtacacacagattatatgcaa
actgttgctgcaactggtcgtttaagctctaacaatcctaacttacaaaatattcctgtg
cgaaccgaaagaggacgattaattcgaaaagcctttattcctcgcaatgaaaattacacg
ttaatttctgccgattattcgcaaatagagctacgaattattgccgctttatctggtgaa
gaaaacatgattgcagcttttcaaaacaaccaagacattcacaaaagcaccgctgcaaaa
gtatttaatgttgcattagaagacgttacaaaagaacaacgaagcaatgctaaaacggta
aatttcggaattatttatggcgtttcggcttttgggctttctaatcaaacctcactttca
agaaaagaaagcgcagagttaattgatgcctattatgcaacgtatccgaaactaaaatcg
tacatgtccaaccaagtagatttcgctagagaaaacggctatgtacaaactgttttggga
agaagacgctatttaaaagatattaattcggccaatatgatggtaaaaagtggtgccgaa
cgaaatgctgtaaacgcacctattcaaggctctgcggccgatattattaaaattgcgatg
attaatattcacaaaaaactaacccaagaaaactggcaatcgaaaatgttattgcaagta
catgacgaattggtttttgatgttcataattctgaattagaaaaaattcaaccgatgata
aaatacgaaatggaaaacgcctttaaaatagatgttccgttagatgttgaaattggaatt
ggcaaaaactggttagaagcgcattaa
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