Flavobacterium psychrophilum V3-5: IA03_02635
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Entry
IA03_02635 CDS
T03659
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpv03032
]
IA03_02635 (gyrB)
03400 DNA repair and recombination proteins [BR:
fpv03400
]
IA03_02635 (gyrB)
Enzymes [BR:
fpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IA03_02635 (gyrB)
DNA replication proteins [BR:
fpv03032
]
Prokaryotic type
DNA Topoisomerases
IA03_02635 (gyrB)
DNA repair and recombination proteins [BR:
fpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IA03_02635 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AIG29436
UniProt:
A0A076P3N5
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All DBs
Position
587961..589904
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AA seq
647 aa
AA seq
DB search
MSDEIKKDNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHC
DTIRVDINEDGSISVEDNGRGIPVGIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSNHLRATVHSSDGKIYEQEYEKGKALYPVKQIGETTKRGTIVTFYPDPSI
FTQTIEYSYDTLSARMRELSFLNKGITITFTDKREKDKDGNFVSEIFHSTEGLKEYIRYL
DGNREPIIAHVISMDNDKGEIPVEVALIYNTSYTENIFSYVNNINTHEGGTHLQGFRTGL
TRSLKKYADSSGMLDKLKFEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPV
SQAVGDMIENYLEENPNDARIIVQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSD
CSEQDPAKCEVFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMHHKVFENEEIRN
IFTALGVTIGTAEDSKALNLEKLRYHKVVIMCDADIDGSHISTLILTFFFRFMKELIEQG
HIYIATPPLYLVKKGNKKEYAWNEVQRDQANERMGGSATIQRYKGLGEMNAEQLWDTTLN
PEFRTLRQVNIDSLAEADRVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaaattaagaaggataattattcagcagatagtattcaggcattagaagga
atggaacatgttcgcatgcgtccctcgatgtatattggagatgtaggtgttcgtggtttg
caccatttagtttacgaagttgtagataactctatcgatgaggcaatgggaggtcattgc
gatacgattcgtgtagatattaatgaagatggttctatttctgtagaagataacggacgt
ggtattcctgtcggaattcataaaaaagaaggcgtttcagctctagaagttgtaatgact
aaaattggtgctggaggaaaatttgataaagattcgtataaagtttctggaggattgcac
ggagtaggggtttctgtagtaaatgctttgtcaaaccacttgcgagcaaccgttcatagt
agcgacggaaagatttacgagcaagaatacgaaaaaggaaaagcactttatcccgtaaag
caaataggcgaaacgactaaacgtggaaccattgtaactttttacccagacccttctatt
tttacccaaaccatagagtattcttatgacactttatctgctcgtatgcgtgaattatct
tttttaaataaaggaatcaccattacttttacagataaaagagaaaaagacaaagacgga
aattttgtttcagaaatttttcattcaacagaaggactaaaagaatatatccgttattta
gatggaaaccgagagccaattattgcgcacgtaatttctatggataacgataaaggagag
attccagttgaggttgccttaatttataatacaagttatacagagaatattttttcttac
gtaaacaatatcaatacacacgaaggaggaacgcatttgcaaggttttagaactggttta
acccgttcgttaaagaaatatgcagattcgtctggaatgttagataaattgaaatttgaa
atttcaggagatgacttccgtgaaggattaacagcgattatttcggtaaaagttgctgaa
cctcaatttgaaggtcaaaccaaaaccaaattaggaaatagagaagtagtttctccagtt
tctcaagcggttggcgatatgattgaaaattatttggaagaaaatccaaatgatgcaaga
atcattgtgcaaaaagtaattttggcagcacaagcacgtcatgctgctaagaaagcccgt
gaaatggtgcagcgaaaaaccgtaatgggtggtggtggcttaccaggaaaactatcagat
tgttctgaacaagatccagcaaaatgtgaagtatttcttgttgagggagattcggcagga
ggaactgcaaaacaaggacgtgatagggcttttcaggcaattttgcctttgcgtggtaag
attttgaatgttgaaaaagcaatgcaccacaaagtttttgaaaacgaagagattcgtaat
atatttacagctttaggcgtaaccattggtactgctgaagacagtaaagcattaaaccta
gaaaaattacgttaccataaagtagtcattatgtgtgatgccgatattgatggtagtcat
atttctaccttaattctgacattcttcttccgttttatgaaagaactaatcgagcaagga
cacatatatatagcaacaccaccattatatcttgttaaaaaagggaataaaaaagaatac
gcctggaacgaagtacaacgagatcaagccaacgagagaatgggtggtagcgcaacaatt
caacgttataaaggtcttggagaaatgaatgcagaacaattgtgggacacaactttaaat
cctgaatttagaactttgcgtcaagtaaatattgatagtttagcagaagctgatagagtt
ttctcaatgttaatgggagatgaggttccgcctcgtagagaatttatcgaaaaaaatgca
gtgtacgcaaatattgacgcataa
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