Flavobacterium psychrophilum V3-5: IA03_03405
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Entry
IA03_03405 CDS
T03659
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Pathway
fpv00260
Glycine, serine and threonine metabolism
fpv00460
Cyanoamino acid metabolism
fpv00630
Glyoxylate and dicarboxylate metabolism
fpv00670
One carbon pool by folate
fpv00680
Methane metabolism
fpv01100
Metabolic pathways
fpv01110
Biosynthesis of secondary metabolites
fpv01120
Microbial metabolism in diverse environments
fpv01200
Carbon metabolism
fpv01230
Biosynthesis of amino acids
fpv01240
Biosynthesis of cofactors
fpv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IA03_03405 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IA03_03405 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IA03_03405 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IA03_03405 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IA03_03405 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IA03_03405 (glyA)
Enzymes [BR:
fpv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IA03_03405 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
DUF3287
Motif
Other DBs
NCBI-ProteinID:
AIG29579
UniProt:
A0A075RY88
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Position
745187..746461
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AA seq
424 aa
AA seq
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MLRDQQIFDLIIEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKDLFGAEYANVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPTFYGVEPETGMLNYDKIQEIATKEQPKLIIAGASAYSRDMDFERFR
KIADSVGAILMADISHPAGLIAKGLMNDPIPHCHIITTTTHKTLRGPRGGLIMMGKDFEN
PWGLKTPKGEIRMMSHVLDMSVFPGNQGGPLEHIIAAKAVAFGEALTDEFFRYAMQVQKN
AKAMAAAFVKRDYHIISGGTDNHMMLIDLRNKNISGKEAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLLEEDMETIVAFIDKVIMNHTNEEILEEVADAVNEMMGERA
IFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgaccaacaaatatttgacctaattattgaagaacaagacagacaaattcac
ggactagagctaattgcttccgaaaattttgtaagcgaccaagtaatggaagctgcagga
tctgtactaacaaataaatatgccgaaggatatcctggaaaaagatattacggcggttgt
gaagtagtcgatgttatcgagcaaattgcaatagatagagccaaagatttatttggtgcc
gagtatgcaaacgtgcaaccacattcagggtcgcaagcaaatacagcagtttttgcagct
tgtttgaaaccaggagatactattttaggtttcgatttatctcacggaggacatttaact
cacggatctccagtaaacttttcaggaaaattatacaatcctactttttatggggtagag
ccagaaacaggaatgctaaactatgataaaatacaagaaattgcaacaaaagagcaacca
aaactaatcattgcaggcgcatctgcttattctcgtgatatggattttgaacgtttccgt
aaaattgcagattcagtaggagcaattttgatggctgatatttcgcatccagcgggatta
atcgctaaaggattaatgaacgacccaattccacattgtcatattataacaacaacaacc
cataaaacacttcgtgggcctcgtggcggattaattatgatgggtaaagattttgaaaac
ccttggggtttaaaaacaccaaaaggagaaataagaatgatgtctcacgttttagatatg
tcagtttttccaggaaatcaaggaggtccactagaacacattatcgcagcaaaagcagta
gcgtttggagaagcattaaccgatgagttttttagatatgccatgcaagtgcaaaaaaat
gccaaagctatggcagccgcttttgtaaaaagagattatcatattatctctggcgggacg
gacaatcacatgatgcttatcgatttaagaaataaaaatatttctgggaaagaagccgaa
aatgctttagtaaaagcagaaattacggtaaacaaaaacatggtcccttttgatgataaa
tcaccatttgtaacttcaggaattcgtgtaggaacgccagctattacaactcgtggcttg
ctagaagaagatatggaaactattgttgcttttattgataaagtaattatgaatcataca
aatgaagaaattctagaagaagttgcagatgcagtaaatgaaatgatgggcgaaagagcg
attttcgtattttaa
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