KEGG   Flavobacterium psychrophilum V3-5: IA03_04425
Entry
IA03_04425        CDS       T03659                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fpv  Flavobacterium psychrophilum V3-5
Pathway
fpv03030  DNA replication
fpv03430  Mismatch repair
fpv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IA03_04425
   03430 Mismatch repair
    IA03_04425
   03440 Homologous recombination
    IA03_04425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpv03032]
    IA03_04425
   03400 DNA repair and recombination proteins [BR:fpv03400]
    IA03_04425
Enzymes [BR:fpv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IA03_04425
DNA replication proteins [BR:fpv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IA03_04425
DNA repair and recombination proteins [BR:fpv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IA03_04425
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: AIG29757
UniProt: A0A076NW45
LinkDB
Position
complement(977782..978348)
AA seq 188 aa
MLDWLKKIGKDYPEFWKNYLVQFEMQTERKVALYIETTGINPAKDKIISIGAIAIEKNQI
RIDNCLEIELNKAEILEGKDFSYQEIQAIESLINFIGNATLVGHRIHYDIQIINEYLHKL
QSGRIKNNLLDVEVMHGRIIDQNAKQFSLTELLSIYKIDSPHIPTSANMAFSIALLFLKL
KSRLKMTN
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctcgattggttaaaaaaaataggcaaagattacccagaattttggaaaaattacctt
gttcagtttgaaatgcaaaccgaaagaaaagttgcattatatatagaaacaacgggaata
aatccagctaaagataaaattatatctattggcgccattgccatcgaaaaaaatcagatt
cgtatagacaattgtttagaaatagaactaaataaagccgagatattagaaggtaaagac
tttagttaccaagagattcaggctatagaatccttaataaattttataggaaatgcaact
ctggtagggcatcgcattcattatgacattcaaattattaatgagtatttgcataaattg
cagagtggtcgcattaaaaataacttgctagatgttgaagtgatgcatggcaggattatt
gaccaaaatgctaaacaattttcattaaccgaattgttatcaatttataaaattgattct
ccacatattcctacatcggcaaacatggcattttcaatagctttgctgtttttgaaatta
aaaagcagattaaaaatgactaattaa

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