Flavobacterium psychrophilum V3-5: IA03_04770
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Entry
IA03_04770 CDS
T03659
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpv03400
]
IA03_04770
Enzymes [BR:
fpv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IA03_04770
DNA repair and recombination proteins [BR:
fpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IA03_04770
Prokaryotic type
IA03_04770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
AIG29824
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Position
1054929..1056215
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AA seq
428 aa
AA seq
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MNIFWFRRDLRLDDNVGLFHALNSDQTILPIFIFDYNILSQLSKDDARVTFIHELLSKMQ
KKLQEKGKSLAVFYGKPSEIFEKLISENKVKTIYTNHDYEPYARKRDKELNQLFANHNIQ
FLTSKDQVIFEKSEVTKDDGKPYIVYTPYTNKWKEKFKQTTLKNYNSENYLDKIVTHPYP
FLSLESIGFETSKITVASYDISENLIDNYEATRNFPSLNKTSFLGIYLRFGAVSVRKMMQ
EAIKSKNETFFKELIWREFFMQILWHFPHTINKSFKEKYDAIIWENKEDLFQKWCQGKTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGETYFATKLLDYEQSSNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDKDLKYIKKWIPELQTSHYPEPIVEHKFARERCL
KVYKEAVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattctggttccgccgtgatttgcgattagatgataatgtaggattatttcat
gctctaaatagtgaccaaactattttgcccatcttcattttcgattataacatactctcg
caactatctaaagatgatgctcgtgttacttttattcacgaactattatctaaaatgcaa
aaaaaattacaagaaaaaggaaaatcgttagctgttttttacggaaaaccatcagaaatt
ttcgaaaaactaatttccgaaaataaagtaaaaacaatttacacaaaccacgattacgaa
ccctacgctcgcaaacgagataaagaactaaaccagctatttgcaaaccataacatacaa
ttcctaaccagcaaagaccaagttattttcgaaaaaagtgaagtcacaaaagatgacgga
aaaccctatatagtttacacaccatatactaacaaatggaaagaaaaatttaagcaaaca
accctaaaaaattataattccgaaaattatttagacaaaatcgttacacacccctaccct
tttctaagcctagaatcgataggatttgaaacatcaaaaataaccgtcgcatcctatgat
atatcagaaaatttaatagataattacgaagctacaagaaatttcccctcactaaataaa
acttcatttctaggtatttatcttcgtttcggagccgtttctgtcagaaaaatgatgcag
gaagccatcaaaagtaaaaacgaaactttttttaaagaacttatttggagagaatttttt
atgcaaatattatggcatttcccacacaccataaataaaagttttaaagaaaaatatgat
gccattatttgggaaaataaagaagatttattccagaaatggtgccaaggaaaaacgggt
tatccctttgtagatgcaggaatgagagagcttaatgcaactggacacatgcacaataga
gtacgcatgatagtggccagttttttatgcaaacatttactaatagattggcgctgggga
gaaacttattttgccacaaaacttttagattacgaacaatcaagtaatgtaggcaactgg
caatgggcggctggttctggtgtagatgcagcaccctattttagaatttttaatcccaca
gaacaaataaaaaaattcgacaaagacttaaaatacatcaaaaaatggattcctgaattg
caaacctctcattatccagaaccaatcgtagaacacaaatttgcaagagaacgctgctta
aaagtttataaagaagccgtaggatag
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