Flavobacterium psychrophilum V3-5: IA03_06730
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Entry
IA03_06730 CDS
T03659
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpv03009
]
IA03_06730
Enzymes [BR:
fpv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IA03_06730
Ribosome biogenesis [BR:
fpv03009
]
Prokaryotic type
ribosomal protein modification factors
IA03_06730
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Tle3_C
Motif
Other DBs
NCBI-ProteinID:
AIG30183
LinkDB
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Position
1457202..1458503
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AA seq
433 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKASGKNVVHEEEGNIVVINTCGFIDNAK
AESVNTILEYADKKERGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPALLKALG
ADYRHELLGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKNVSQTIEKLVKEAEGLA
KNGVKELILIAQDLTYYGLDLYKKRALGELLEALVKIEGIEWIRLHYAFPTGFPMDVLEI
MKREPKICNYIDIPLQHISDSILKSMKRGTTREKTTKLLKDFRAAVPGMAIRTTLIVGYP
GETEEDFEILKEFVQEMKFDRMGCFAYSHEENTGAYELVDDVPDEVKQARSLEIMDLQSQ
ISWDLNQEKLGQTFRCIIDRKEGGHFVGRTEFDSPDVDNEVLIDATKHYVKTGEFVNIKI
IEATEFDLYGEPA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcgttaaagaaaaacaaaatcaatgtaatcactcttgggtgttctaaa
aacgtgtatgacagcgaagtgcttatggggcaactcaaagccagcggaaaaaacgtggta
catgaagaagaagggaatattgtggtgataaatacttgcggatttatagataatgccaaa
gcagaatctgtaaatacaattttggaatatgctgacaaaaaagaacgtggattagttgac
aaagtatttgtaaccggatgtctatctgaacgttacagaccagatttagaaaaagaaatc
cccaatgtagaccaatattttggtactactgaattgcctgctttattaaaagctttagga
gcagattacagacatgaattattaggagaacgtttaaccacaacacctaagaactatgcg
tacctaaaaatttctgaaggttgcgaccgtccttgtagtttttgtgctattccgcttatg
cgtggcaaaaatgtatcgcaaaccatagagaaattagtaaaagaagccgaaggtttggct
aaaaatggtgtaaaagaactaattcttattgcccaagatttgacttattatggtcttgat
ttatacaaaaaaagagcactaggcgaattgctagaagcactagtaaaaatagaaggtatc
gagtggattcgtttgcattacgccttccctactggtttccctatggatgttcttgaaatc
atgaaacgagaacctaagatttgtaattatatagatattccgttgcaacacatttcagat
tctatcctaaaatcgatgaaacgtggaacaacaagagaaaaaaccaccaaattactaaaa
gattttcgtgcagccgttcctggaatggccattagaacaactctaattgtaggatatcct
ggagaaactgaagaagatttcgagattctgaaagaatttgttcaggaaatgaaatttgac
cgaatgggctgttttgcttattcgcacgaagaaaatacaggtgcttacgaattagtagat
gatgttccagatgaagtgaaacaagcacgttcgctagaaataatggatttacaatcgcaa
atttcttgggatttgaaccaagaaaaactaggacaaactttccgttgtattattgacaga
aaagaaggcggacattttgtaggaagaaccgaatttgatagtcctgatgtagataacgaa
gtacttatagacgctacaaaacattatgtaaaaacgggtgaatttgtaaatataaaaatt
attgaagctacagagtttgacttatacggcgaaccagcgtaa
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