Flavobacterium psychrophilum V3-5: IA03_06835
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Entry
IA03_06835 CDS
T03659
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpv03016
]
IA03_06835
Enzymes [BR:
fpv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IA03_06835
Transfer RNA biogenesis [BR:
fpv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IA03_06835
Prokaryotic type
IA03_06835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIG30202
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All DBs
Position
1480348..1481100
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AA seq
250 aa
AA seq
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MRYFIEFAYNGTQYHGWQYQPNATSVQETLNKVFSTLLQEKIDIMGAGRTDAGVHAKQMY
GHFDTDISIDNAKFIHKANSFLPKDIVIFNIIPVHNQAHARFDATSRTYNYHISTYKNVF
TNNLAWYSSKKIDVIAMNEAAKVLLKFTDFKCFSKTNTDVNTYNCKITEAFWSIEKEQLI
FTITADRFLRNMVRAIVGTLINIGLHKITIENFIQIIESQNRENAGFSVPAHGLFLTNIE
YPYIKKDESI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttatagaatttgcttataacggaacacaatatcatggctggcaataccaa
cccaatgcgacatcagtacaagaaactttaaacaaagttttttcgacactactacaagaa
aaaatagatattatgggtgctggccgtactgatgctggtgtgcatgccaaacaaatgtat
ggtcattttgatactgatattagtatcgataatgcaaaatttattcacaaagccaattca
tttttacccaaagacattgtgatttttaatataattcccgttcacaatcaagcccatgcc
agatttgatgctacttcacgaacatacaactatcatatttcgacttacaaaaatgttttt
actaataatttagcttggtattcatcaaaaaaaatagatgtcattgccatgaatgaagcg
gcaaaagtattattaaaatttaccgattttaaatgtttttcgaaaacaaatacagatgta
aatacttataactgcaagataaccgaagcattttggagcatcgaaaaagagcaactcatc
tttaccatcacggccgacagatttttaagaaatatggtacgtgccattgtaggaacactc
ataaatattggtttacacaaaataacaatcgaaaattttatacaaataatcgaatctcag
aacagagaaaacgcagggttttcggttccagcacatggtttatttctcacaaatatcgaa
tacccgtatataaaaaaagatgaaagcatttga
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