Flavobacterium psychrophilum V3-5: IA03_09750
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Entry
IA03_09750 CDS
T03659
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Pathway
fpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IA03_09750 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpv03019
]
IA03_09750 (groEL)
03110 Chaperones and folding catalysts [BR:
fpv03110
]
IA03_09750 (groEL)
03029 Mitochondrial biogenesis [BR:
fpv03029
]
IA03_09750 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fpv04147
]
IA03_09750 (groEL)
Enzymes [BR:
fpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IA03_09750 (groEL)
Messenger RNA biogenesis [BR:
fpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IA03_09750 (groEL)
Chaperones and folding catalysts [BR:
fpv03110
]
Heat shock proteins
HSP60 / Chaperonin
IA03_09750 (groEL)
Mitochondrial biogenesis [BR:
fpv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IA03_09750 (groEL)
Exosome [BR:
fpv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IA03_09750 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
IA03_09750 (groEL)
Exosomal proteins of breast cancer cells
IA03_09750 (groEL)
Exosomal proteins of colorectal cancer cells
IA03_09750 (groEL)
Exosomal proteins of bladder cancer cells
IA03_09750 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AIG30734
UniProt:
Q56HW3
LinkDB
All DBs
Position
2104069..2105697
Genome browser
AA seq
542 aa
AA seq
DB search
MAKNIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVTVAKEIE
LQDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLTKQAKVVGSDSEKIKQIASISANNDEVIGELIANAFAKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMDAELENPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENTTIEMLGTAKRVTIDKDNTTIVSGAGEADMIKNRVNQIKGQMEASTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKNVLKDIKADNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVEIKEENAGGGQMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatataaaatttgatatagaagcacgtgacggattaaaacgtggcgtagac
gcattagcaaacgcagtaaaagtaacacttggaccaaaaggacgtaatgtgattattgga
aaatcatttggcggaccaacagtcaccaaagacggagttacagtggccaaagaaatagaa
ttacaagaccctctagaaaacatgggagctcaaatggtaaaagaagtagcatcgaaaacc
aatgatttggctggagatggaactacaacggcaaccgttttagcacaagctatcgtaaaa
gaaggcttaaaaaatgtagcagctggagctaacccaatggatttaaaacgaggaatagac
aaagctgtcgaagcaattgttgccgacttgacaaaacaagctaaagttgtgggaagcgat
tcagaaaaaataaaacaaattgcgtctatctctgcaaacaatgatgaagtaattggcgaa
ttaatagcaaacgctttcgcaaaagtaggaaaagaaggagttatcactgttgaagaagcc
aaaggaacagatacttatgtagatgttgtagaaggaatgcaattcgatcgaggatacctt
tcgccatattttgtaaccaatcctgaaaaaatggatgcagaattagaaaacccttacatc
cttctgtatgataaaaaagtttcttctctaaaagaattattacccgttcttgaaccagta
gcacaatcaggaaaaccattattaatcattgccgaagatgtagacggagaagcattatct
acattagtagtaaacaaactacgtggagccttaaaaattgctgctgtaaaagcaccaggt
tttggcgacagaagaaaagcaatgctagaagatattgccatcttaacaggaggaactgtt
atctctgaagaaagaggatttactttagaaaacacaactatcgaaatgttaggaactgca
aaaagagtaactatcgataaagacaacactacaattgtaagtggcgccggagaagctgat
atgattaaaaatcgtgtaaaccaaataaaaggtcaaatggaagcttctacttctgattat
gacaaagaaaaactacaagaacgcttggctaaattagctggaggtgttgctgttctctat
gttggcgcagcttcagaagtagaaatgaaagaaaagaaagaccgtgtagacgatgcatta
cacgcaactcgcgcagctgtcgaagaaggaatagttgcaggtggtggcgtagcgttacta
agagctaaaaacgtcttaaaagacattaaagcagacaatgccgatgaagccacaggaatt
caaatcgtatctcgtgcagtagaagctcccctaagaaccattgtagaaaacgcaggtcta
gaaggctctgtagtagttgcaaaagttgccgaaggttctggtgattttggttacaatgct
aaaactgatgaatatgtagatatgctaaaagctggaattatagaccctaaaaaagtaacc
cgtgtagccttagaaaacgctgcttcagttgcaggaatgatccttactaccgaatgcgct
ttagtagaaataaaagaagaaaatgctggtggcggacaaatgggtggcggtatgccaggc
atgatgtaa
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