Flavobacterium psychrophilum V3-5: IA03_09830
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Entry
IA03_09830 CDS
T03659
Name
(GenBank) DNA recombination protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
fpv
Flavobacterium psychrophilum V3-5
Pathway
fpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IA03_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpv03400
]
IA03_09830
DNA repair and recombination proteins [BR:
fpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IA03_09830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
ABC_tran
Roc
RsgA_GTPase
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AIG30750
LinkDB
All DBs
Position
complement(2120963..2122042)
Genome browser
AA seq
359 aa
AA seq
DB search
MYLKKISLFNFKNFSDTSFNFEHKINCFVGKNGVGKTNVLDAIYHLSFGKSYFNTLAVQN
IKHDEDFFVIDGEFDKQERSENILCSLKKGQKKILKRNGKIYEKFSDHLGFIPLVIISPT
DADLIREGSETRRKFIDSVISQLDNQYLQGLILYQKVLSQRNALLKYFAVNRIFETGTLD
IYNEQLNDLGQSIFEKRKQFLNDFIPIFNSFYQNISNSAETVQLEYESQLEKQDLLSLLQ
ENINKDRSLQYTSVGVHKDDLSFNIAHYPIKKFGSQGQQKSFLIALKLAQFEFVKKQSGE
KPILLFDDIFDKLDETRVEKIVAMVNNDDFGQLFISDTHSQRTENIVKMTHQSYKIFNL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaaaaaaatctcattatttaattttaaaaattttagcgacactagtttcaat
ttcgagcataaaataaattgtttcgtgggtaaaaatggtgttggaaaaacaaacgtactc
gatgcaatttatcatttgtctttcgggaaaagctattttaatacgttggccgttcaaaat
ataaaacacgatgaagatttttttgtgattgatggcgaattcgacaaacaagaaagatca
gaaaatattctttgcagtttaaaaaaaggacaaaaaaaaatattgaagcgcaacggaaaa
atatacgaaaagttttctgatcatttaggatttataccattagtaattatttctccaacc
gatgccgatcttattcgagaaggaagcgaaactagacgaaaattcatagatagtgtaatt
tctcaattagataatcaatatttacaggggttaattttgtaccaaaaagtattaagtcag
cgtaatgcattgcttaaatattttgcggtaaaccgtatttttgaaacaggaactttagat
atttataacgaacaattaaatgatttggggcaaagtattttcgaaaaaagaaaacaattt
ttaaacgattttattcccatttttaattcattttatcaaaatatttctaattcggccgaa
accgtgcaattagaatacgaaagtcagttagaaaaacaagatttattatcgcttttgcaa
gaaaatattaataaagacaggtccttacaatatacaagtgttggggtgcataaagacgat
ttgtcttttaatatagcacattaccctattaaaaaatttggttctcagggacaacagaaa
tcttttctgattgctttaaaattagctcaatttgaatttgtaaaaaaacaaagtggggaa
aaacctattttacttttcgacgatatttttgataaactagacgaaactcgtgtcgaaaaa
attgtagcaatggtaaataatgatgattttggacagttgtttatttccgatacacattcc
cagcgaacagaaaatattgtaaaaatgacccaccaaagttataagatatttaatctttaa
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