Flavobacterium psychrophilum V3-5: IA03_11385
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Entry
IA03_11385 CDS
T03659
Name
(GenBank) general secretion pathway protein GspE
KO
K02652
type IV pilus assembly protein PilB
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fpv02044
]
IA03_11385
02035 Bacterial motility proteins [BR:
fpv02035
]
IA03_11385
Secretion system [BR:
fpv02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IA03_11385
Bacterial motility proteins [BR:
fpv02035
]
Pilus system
Pilus assembly proteins
IA03_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
AAA_14
nSTAND3
ResIII
AAA_22
AAA_23
AAA_19
AAA_29
Rad17
AAA
AAA_11
AAA_30
AAA_7
Zeta_toxin
ABC_tran
Sigma54_activ_2
cobW
ATPase_2
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIG31026
LinkDB
All DBs
Position
complement(2447143..2448546)
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AA seq
467 aa
AA seq
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MSDFSLPVELSQLIKTEQAYHYRIIPTKKLGTSIVLKTDNSNISSLQSELTILLGFPTQL
EVDTTENINKYLTTNYRKSASNTVSEIHYSNDFLEKILVNAKEIESSDIHFEPFEKMARV
RFRIDGKLKEQFHIPTDEYPIIINKIKIRAQLDISEKRLPQDGRITVVTDYEDFDIRVSV
LPALHGEKVVLRILSKDTSHIDINSLGFSDDEIKTYLENIKKPNGIVLISGPTGSGKTTT
LYATLKKLNLPNINILTVEDPIEYTLEGITQVQLRENIGLDFATTLRTFLRQDPDIIMVG
EIRDVNTANMAIRAALTGHLVLSTIHTNSAWATVSRLIDMGIPSFLIASTLNISVAQRLV
RKLCNDCKTKKTIETELFPSGFEIPESLQFHYTATGCEHCYHTGYSGRKAIYEILPIDSE
LSTLIKNNQLSIDDYIEDKDIITLKKNALNLIKDGITSVEEVFSLLM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttttccctacccgtagaattatcacaactgataaaaacggaacaagcgtat
cattacagaataataccaactaaaaaattaggcacttctattgtattaaaaactgacaat
agtaatatatctagtttacaatcagaattaactattttactaggttttcctacacaatta
gaagttgataccaccgaaaacatcaacaaatatctaactactaattatagaaaatctgct
tcaaatacggtttcagagattcattattcgaatgattttctggaaaaaatattggttaat
gcaaaagaaatagaaagtagtgatattcacttcgaaccttttgagaaaatggctcgtgtt
cgttttagaattgacggaaaactaaaggaacaatttcacattcctaccgacgaatatcct
atcattatcaacaaaataaaaattagagcacagcttgatatttctgaaaaacggttgcca
caagatggacgtattacggtcgtaaccgattatgaagattttgacattcgtgtttcggtt
ttaccagctttgcacggcgaaaaagtggttttgcgtattttaagcaaggataccagccat
attgatattaattcactaggtttttccgatgatgaaataaaaacatatctcgaaaatatt
aaaaaacccaatggtattgttttaatttctggccctactggatcaggaaaaacaaccact
ttatacgccacccttaaaaaattaaatcttcctaatattaacattcttacggttgaagat
cctatcgaatatactttggaaggaattactcaagtacaattgagagaaaatattggtctt
gattttgctactacactccgtacttttttaagacaagatcctgatattattatggtgggg
gaaatacgagatgtaaatacagcgaatatggccattagagccgcattgactggacatctt
gttttgtcaacgatacataccaattcagcttgggcaactgtttctagattgattgacatg
ggcattccttcgtttctaatagccagtacactcaacattagcgtggcgcaacgtttggtt
agaaaattatgcaatgattgtaaaacaaaaaagacaattgagacggaattatttccctct
ggatttgagattcctgaaagtttgcaatttcactacacagcaacaggttgtgagcattgt
tatcatacgggctattcaggaagaaaagcgatttatgaaattcttcctattgacagtgaa
ctttctacattgattaaaaataaccaactttctattgatgattatatcgaagataaagac
attatcactttgaaaaaaaatgcactgaaccttataaaagatggaataacatctgtagaa
gaagttttttctttacttatgtaa
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