Flavobacterium psychrophilum V3-5: IA03_11685
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Entry
IA03_11685 CDS
T03659
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpv03016
]
IA03_11685
Enzymes [BR:
fpv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IA03_11685
Transfer RNA biogenesis [BR:
fpv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IA03_11685
Prokaryotic type
IA03_11685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIG31082
UniProt:
A0A075RTK3
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All DBs
Position
complement(2514866..2515570)
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AA seq
234 aa
AA seq
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MTPEDYLNGQVLLIDKPLKWSSFQAVNKLKYSLINKLGLPKKFKIGHAGTLDPLATGLLI
VCTGKLTKSISEIQGQAKEYTGTFYIGATTPSYDLETQIDATFPIAHITEALIHETVKQF
LGEIDQKPPVFSAIKKDGVRLYEHARAGVEVEIASRKTQIYEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGLALQSGAHLTVLRRTKIGNYDVKKAIDVTLFDELIVAKNEL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactccagaagattatctaaacggtcaagttttactcatagacaaaccattaaaatgg
agttcttttcaagcagtaaataaattaaaatattcgcttataaataaattaggattacca
aagaagttcaaaattggccatgcaggaacactcgatccattagccacaggtttgttaatt
gtttgtacaggaaagcttacaaaaagcatttccgaaatacaaggtcaggccaaagaatat
acaggtactttctacattggcgccactacaccatcgtatgatttagaaacccaaatagac
gccactttcccaatagcacatattaccgaagccttaattcacgaaacagtgaaacaattt
ttaggcgaaatagatcaaaaaccacccgttttttcggctataaaaaaagacggcgtgcga
ttatacgaacacgctcgtgctggtgttgaagtagaaatcgcttctagaaaaacacaaatt
tacgaattcgaaattactcgaatcgctttgccagaaatcgattttagagtcgtttgtagt
aaaggaacttatattcgttcgttagcttatgattttggattggctttgcaatctggcgca
catcttactgttttgcgaagaacaaaaattggcaattatgatgtaaaaaaggctattgat
gttactttgtttgatgaattgattgttgcaaaaaatgaattataa
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