Flavobacterium psychrophilum V3-5: IA03_12005
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Entry
IA03_12005 CDS
T03659
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fpv
Flavobacterium psychrophilum V3-5
Pathway
fpv00550
Peptidoglycan biosynthesis
fpv01100
Metabolic pathways
fpv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IA03_12005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IA03_12005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpv01011
]
IA03_12005
Enzymes [BR:
fpv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IA03_12005
Peptidoglycan biosynthesis and degradation proteins [BR:
fpv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IA03_12005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AIG31144
UniProt:
A0A076NWY2
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All DBs
Position
2589220..2591160
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AA seq
646 aa
AA seq
DB search
MRKLLLPGIVIIAGILITARLFYLQIIDDTFKLKSENISIKIKYDYPERGYIYDRNGALM
VANQPSYDIMVIPRETKSMDTIEFCNLLNITKTDFIKKIQKAVVYSPMLPSVFLGQLNKL
EYAAFQEKERKFEGFYIQKRSLREYQLTAGANVFGFITQANEAMVKQNPYYKSGDLLGKQ
GVEETYEAELRGTKGVKHIQRDRFNREIGPYKEGKYDTIAKQGKDITLTIDAELQKYGEA
LMKNKRGGIIAIEPSTGEILCLVTAPSYDPAILVGRQRSRNYTKLYNDSLAKPLYDRSLL
AEYPPGSPFKILTALAGLQAKVIDTSSSFICNRGFSYGRGRFMGCHCGGGVRKLHMGIAK
SCNTYFANTYLRTIAKFPTPTAGVDFWSHNIKSFGLGQFMGYDLPTGRKGKIPTSETYKK
MYPNGGWRGTAVISNSIGQGEVLMTPIQLANMMATVANQGYYYTPHIIKKIKGQQIDPKF
RTKHVTSIDKKYFKPVINGLAEVFKTGTAYFLKVDGIEICGKTGTADNFARVNGKKVMLK
PHSVFVAFAPKVNPTIAIAVLVENGGFGSTVAGPITTLMLEKYIKKEITMKDREKRVLET
SLQGEYNRFTRKYLDSMYKIKIRKDSILRTINTKKLDSIKKSKPTT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagctattacttccagggatagttataattgctggcattcttatcacagcaaga
ctcttttatttgcaaattattgatgacacatttaaactaaaatccgaaaatatttcgatc
aagattaaatatgactatcccgaaagaggttatatttatgatagaaacggagcactcatg
gttgccaaccaaccatcgtatgacatcatggtaatacctcgtgaaaccaaaagcatggac
acgattgagttttgcaatcttctaaatattaccaagaccgattttataaaaaaaatacaa
aaagcagtcgtttacagccccatgctaccctcagtatttttaggacagctaaacaaatta
gaatatgctgctttccaagaaaaagaaagaaaatttgaagggttttatatacagaaacgt
tccctcagagaatatcaactaaccgcaggagccaatgtttttgggtttattacccaagca
aatgaagcgatggtaaaacaaaatccctattacaaaagtggcgatttgctaggaaaacaa
ggggtagaagaaacctatgaagcagagcttcgaggtacaaaaggcgtaaaacacatacaa
agagaccgtttcaatagagaaataggcccttacaaagaaggaaaatacgacaccattgca
aaacaaggaaaagacatcacgctaactattgatgcggaacttcaaaaatacggagaagca
ctaatgaaaaacaaacgaggcggtattatcgccatcgaacctagtacgggagaaatcctt
tgtttagttactgctccgtcctatgaccctgccattttagtaggcagacaacgctcacga
aactacacgaaactttataatgattcattagcaaaaccactatacgatagaagcttacta
gcagaataccctcctggttcccccttcaaaatattaacagcattagcaggcttacaagca
aaggtaatagacacatcgagtagctttatatgcaaccgtggctttagctatggccgagga
agatttatgggttgccactgtggtggtggtgttcgcaaactacacatgggaatagcaaaa
tcttgtaatacctattttgcaaatacttatttgagaaccatcgcaaaatttccaacacca
acagcaggcgtagatttttggagccataacataaagagttttggcttggggcagtttatg
ggctatgatttacccacaggccgaaaaggaaaaattccaacatctgaaacctataaaaaa
atgtaccccaatggtggttggagaggaactgcagtaatatcaaattcgataggacaagga
gaagtcctaatgacgccaatacaattggcaaatatgatggcaacagttgcaaaccaaggt
tattattacacacctcatatcatcaaaaaaattaaaggacaacaaatagatccaaagttt
agaacaaaacacgtaacgagtatcgacaaaaaatatttcaaaccagttattaatggtttg
gcagaagtatttaaaacaggaactgcctattttctaaaagtagacggaatagaaatttgc
ggaaaaacaggaaccgccgacaattttgcccgagtaaacggaaagaaagtaatgctaaaa
ccacactcagtattcgtagcatttgcacccaaagtaaaccctacaatagccattgcagtt
ttagtcgaaaacgggggttttggttcgactgtggctggccccattactactttaatgtta
gaaaaatacattaaaaaagaaatcaccatgaaagacagagaaaagcgcgttttagaaacc
agtcttcaaggagaatataacagatttacacgaaaatacctagactctatgtacaaaatt
aagattagaaaagactctatcttacgaacaataaacacaaaaaaactagattctattaag
aaaagcaaacctacaacgtaa
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