Flavobacterium psychrophilum V3-5: IA03_12340
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Entry
IA03_12340 CDS
T03659
Name
(GenBank) RNA-binding protein
KO
K06959
protein Tex
Organism
fpv
Flavobacterium psychrophilum V3-5
Brite
KEGG Orthology (KO) [BR:
fpv00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
IA03_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
Tex_N
S1
YqgF
HHH_7
T2SSK
HHH_6
NXF_NTF2
DUF7690
HHH_2
HHH
ATP-synt_ab_C
Spt6_S1
CTXphi_pIII-N1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AIG31207
LinkDB
All DBs
Position
complement(2659503..2661659)
Genome browser
AA seq
718 aa
AA seq
DB search
MTNIQFIAKQVATTPKNIESTVKLLNEDCTIPFISRYRKDTTGNLDEVFIEQIAKLNKEY
DLIVKRKEGILKSIEEQKALTPELKQKIDNSFDLQEIEDFYLPYKKKKKTKADVARENGL
EPLAKIIMNQKNDAVDFLATQYLNSNVINEEAALQGARDIIAEWVNENIYVRKQLRRLYE
RKATITTKVVKKKEEEEAAQKFNQYFEWSENLTKAASHRLLAMLRAEKEGFVKIKIEVDL
DEAYDLIDEIIIKNTNSAAISHVQLAIEDSYKRLLTPAISNEALQEAKAKADANSIQVFA
NNLGQLLLAPPLGEKRILAIDPGFRSGCKIVCLDEKGDLLYNETIYPHAPQNETAMAMKK
IKSMVNAYNIDAISIGNGTASRETEFFIKKIAFETRAVGEQGEAKPVQVFIVSEAGASVY
SASKIARDEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKAIGVGQYQHDVDQTKLKEEL
DNTVIRCVNSVGININTASKHLLSYVSGIGEKLAENIVQYRSENGPFENRKQLKKVPRLG
EKAYQQGVAFIRIHNAKNPLDNSAVHPEAYAIVEKMAKDLKLSVHDLIANKEKTALIKPE
HYITPEIGLLTLKDIIKELEKPGLDPRKSAKAFEFDPNVKTIKDLRTGMILPGIVNNITN
FGCFVDIGTKESGLVHISQLKAGFVSDVNEVVKLHQHVTVKVTEVDEDRKRIQLTMIL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacatacaatttatagcaaaacaagtagctaccacaccaaaaaatatagaatct
actgtaaaattattaaatgaagattgtacaattccttttatttctcgttaccgaaaagac
accacaggaaatctcgatgaggtttttatcgagcaaattgccaagttaaacaaagaatat
gatcttattgtaaaacgaaaagaaggtattttaaaatcgatagaagagcaaaaagcacta
acaccagaattgaaacaaaaaatcgataattctttcgatttacaagaaatagaagatttt
tatttgccttacaaaaagaaaaagaaaaccaaggccgatgtagctcgtgaaaacggatta
gaaccactagctaaaatcatcatgaatcagaaaaatgatgctgtcgatttcttagcaacc
caatatttgaacagtaatgtgattaatgaagaggctgctttgcaaggcgcacgagatatt
atcgccgaatgggttaacgaaaacatctatgttcgcaagcaacttagaagactttatgag
cgcaaagcaaccattacgactaaagttgttaaaaagaaagaagaagaagaagcggcacaa
aaatttaaccaatatttcgaatggagtgagaatttaaccaaagccgcttcacacagatta
ttagccatgcttcgggcagaaaaggaaggatttgttaaaataaaaatagaagtagatctc
gatgaagcttatgatttaattgatgaaattatcatcaaaaacactaacagtgctgccatt
tctcatgtacaattggccattgaagacagttacaaaagattactcactcctgccatttcg
aacgaagctttacaagaggccaaagccaaagccgatgccaattctattcaggtttttgcc
aataatttagggcaacttttattagcaccaccattaggagaaaaacgaattctagccatc
gatcccggatttcgttcgggttgtaagattgtttgtctggacgaaaaaggcgatttatta
tacaacgaaaccatttatccgcacgccccacaaaacgaaactgcgatggcgatgaaaaag
ataaaatcgatggtcaatgcttataatatagatgctatttctataggaaacggaacagcg
agtcgagaaaccgaatttttcatcaaaaaaattgctttcgaaactcgagccgtaggcgaa
caaggcgaagccaaacccgttcaagtatttatcgtatctgaggcaggtgcctcggtatat
tcggcatcaaaaattgcgagagacgaatttcctaattacgacgttaccgttcgtggttcg
gtttccatcggaagaagattatcggatccgttggcagaattagtaaaaatagatcccaaa
gctattggcgtagggcaataccaacacgatgtagaccaaacaaaattaaaagaagagcta
gataatacggtcattcgatgcgtaaattcggtaggaataaacattaataccgccagcaaa
catttgctgagttatgtatctggaataggggagaaattagccgaaaatattgtgcaatac
cgctcagaaaacggaccatttgaaaacagaaaacaattaaagaaagtacctcgtttgggg
gaaaaagcttaccaacaaggtgtggcttttattagaattcacaatgccaaaaacccgtta
gacaattcggcagtgcatcctgaagcctacgcaattgtagaaaaaatggcaaaagatttg
aagttatctgtacatgatttaattgccaacaaagaaaaaacggctttaataaaaccggag
cattatatcacgcccgaaataggtttattaaccctaaaagacattataaaagaactcgaa
aaaccaggtttagacccgagaaaatcggccaaagctttcgaatttgaccctaatgtaaaa
accataaaagaccttcgaactggcatgattttaccaggaattgtaaacaatattaccaat
tttggttgttttgtcgatattggtactaaagaaagtggcttggttcacatttcgcaactt
aaagcaggttttgtgagtgatgtaaatgaagtagtcaagttgcaccaacacgttaccgta
aaagtcactgaggttgatgaagatagaaaacgaattcaattgacgatgattttataa
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