Flavobacterium psychrophilum V4-24: IA04_00210
Help
Entry
IA04_00210 CDS
T03660
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00450
Selenocompound metabolism
fpw00970
Aminoacyl-tRNA biosynthesis
fpw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IA04_00210
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IA04_00210
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpw01007
]
IA04_00210
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpw03016
]
IA04_00210
Enzymes [BR:
fpw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
IA04_00210
Amino acid related enzymes [BR:
fpw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
IA04_00210
Transfer RNA biogenesis [BR:
fpw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IA04_00210
Prokaryotic type
Other AARSs
IA04_00210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
AIG35808
LinkDB
All DBs
Position
complement(50851..52911)
Genome browser
AA seq
686 aa
AA seq
DB search
MIQNPKRYTITAALPYTNGPIHIGHLAGVYMPSDIYSRYLRLQGKDVAFMCGSDEHGVAI
SMKAKKEGITPQEVIDKYDGIIRKSFVDFGISFDNYSRTSAKIHHDTASEFFKKLYDKGD
FIEEVTEQLYDAKADQFLADRFVVGTCPKCGNEEAYGDQCEKCGSTLNATDLINPKSTIT
GETPIMKSTKHWFLPLDRYSDFLTKWILEGHKSDWKPNVYGQVKSWIDGGLEPRAVTRDL
DWGIDVPVAGAEGKKLYVWFDAPIGYISATKEWAAREGKDWELYWKNEDTKLVHFIGKDN
IVFHCIIFPAMLKAEGSYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPNQQDV
LRYALTANAPESKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKYYEGVVPTPNKFS
EVDEATLTELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPWKMVKTDPERV
KTQMYVALQIATALRVLCEPFLPFTAEKLNKMLKIDAKLSWNDVTTNSDLILAGHKIGEG
EILFAQIEDEQIQKQIDKLEATKTANIAENKKAEPQKELIQYDDFAKMDLRVGTIIEAEK
MPKANKLLVLKVDTGIDVRTIVSGIAESFSPEEIIGKQVTVLVNLAPRALRGIESQGMIL
MTNLPDGKLAFVNPDVAGVGNGEGIN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaaccctaaaagatatacgattacggcagctttgccctatacaaacggacct
attcatattgggcatttggcgggtgtttacatgccttcagacatttattcacgctattta
agattgcaaggaaaagatgtggcgtttatgtgcggaagcgacgaacatggtgttgctatt
tcgatgaaagccaaaaaagaaggcattacacctcaggaagtgattgataaatatgacgga
attatacgcaaatcgtttgtcgatttcggaatttctttcgataattattcgagaacttcg
gctaaaattcaccatgataccgcttcggaattttttaagaaattgtatgacaaaggcgat
tttatagaagaagtgacggagcaattgtatgatgccaaagccgatcagtttcttgccgat
cgttttgtggtaggaacttgccctaaatgtggcaacgaagaagcgtatggcgaccaatgc
gaaaaatgtggttcgaccttaaatgctacagatttaattaatccgaaatcgactattact
ggcgaaacaccaataatgaaatcgacaaaacactggtttttgcctttagacagatattcg
gattttctaacgaaatggattcttgaagggcacaaaagtgattggaaacccaatgtgtac
ggtcaagtaaaatcttggatcgatggcggattagaacctcgtgccgtaactcgcgattta
gactggggaatcgacgttcctgtggctggtgccgaaggaaaaaaattatatgtttggttt
gatgcgcctattggttatatttctgccaccaaagaatgggcagctagagaaggaaaagat
tgggaactgtattggaagaatgaagatacaaagttggtgcattttataggaaaagacaat
attgtttttcactgtattatttttcctgccatgctaaaagcggaaggaagttatattttg
ccagacaatgttcctgctaatgagttcctgaatttagaaggaaataaattatcaacgtct
aaaaactgggccgtttggttgcacgaatatctagaagatttcccaaaccagcaagatgtt
ttgcgttatgcacttaccgccaatgctccagaaagtaaagacaacgattttacttggaag
gattttcaggcgagaaataataacgaattggctgccatttttggaaacttcatcaatcgt
gtagtggttttaaccaataaatattacgaaggcgttgtgccaactcctaacaaattttcg
gaagtagatgaagccactttaaccgaattgaaagcctatcctgctgtaatttctagttcg
atagaaagataccgttttcgtgaagctttgggcgaattaatgaatgtagcccgattagga
aacaaatatctagcagacgaagagccttggaaaatggtaaaaaccgatccagaacgtgta
aaaacgcaaatgtatgtggctttgcaaattgctacggcgctgcgtgttttgtgtgaacct
ttcctgccgtttacggctgagaaattaaacaaaatgctgaaaattgatgctaaattaagt
tggaatgatgtaacaacaaattctgatttgattcttgctggacacaaaattggcgaagga
gaaatattatttgcacaaatagaagacgaacaaatacaaaaacaaatagacaaattggaa
gctacaaaaacggctaatattgccgaaaacaaaaaagcagaaccacagaaagaactcatt
caatacgatgattttgctaaaatggatttgcgtgtaggaaccattatcgaagccgaaaaa
atgccaaaagccaacaaattgttagttttaaaagtagatactggaatcgatgttcgcaca
attgtttcaggaattgccgaaagcttttcgccagaagaaatcataggaaaacaagtcacg
gttttagtaaatctagcgccaagagctttgcgtggtatagaaagtcaaggtatgattttg
atgaccaatttgccagacgggaaactagcttttgtaaatcctgatgttgctggagttggg
aatggagaaggaataaattaa
DBGET
integrated database retrieval system
