KEGG   Flavobacterium psychrophilum V4-24: IA04_00900
Entry
IA04_00900        CDS       T03660                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
fpw  Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:fpw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    IA04_00900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpw03019]
    IA04_00900
   03009 Ribosome biogenesis [BR:fpw03009]
    IA04_00900
   03036 Chromosome and associated proteins [BR:fpw03036]
    IA04_00900
Enzymes [BR:fpw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IA04_00900
Messenger RNA biogenesis [BR:fpw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IA04_00900
Ribosome biogenesis [BR:fpw03009]
 Eukaryotic type
  90S particles
   RNase
    IA04_00900
 Prokaryotic type
  rRNA processing factors
   IA04_00900
Chromosome and associated proteins [BR:fpw03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IA04_00900
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DUF7515
Other DBs
NCBI-ProteinID: AIG35931
UniProt: A0A076NSN3
LinkDB
Position
204102..204842
AA seq 246 aa
MSFIKKIFLSSRSSEDGLFFSKLEKILGFKPLNLTHFRRAFTHRSMNKLDEKGNPMNYER
LEFMGDAMLGSVIAAHLFNMSPTGDEGYLTKMRSKIVSREHLNELGKDLNLIQFLESKVT
LQNFGENIHGNLFEAFVGAIYLDRGFVYCEKFIHKKVIKPYVDIDKLEGKVISYKSLLIE
WCQKEKRVFHYDIYEDEDAGKLKYFGVKLSIDGKVVAKARATSKKKAEEIASKRGYFVFQ
SEIDGK
NT seq 741 nt   +upstreamnt  +downstreamnt
atgagttttattaaaaaaatatttttaagttcccgttcttcagaggacgggctttttttt
agtaaactcgaaaaaatattaggatttaaacctttaaatcttactcattttcgcagagcc
tttacccatcgatcaatgaataagttagatgaaaaaggaaatccaatgaattatgagcgg
ctagaatttatgggcgatgctatgctgggaagtgttattgcagctcatttatttaatatg
tctcctacaggcgatgaaggatatttaactaaaatgagatctaaaattgtaagtcgtgaa
cacttaaacgaattaggaaaagatcttaatctgatacagtttttggaaagcaaagtaaca
cttcagaattttggagaaaacatacacggcaatctttttgaagcttttgttggagcgatt
taccttgatagaggttttgtgtattgcgagaaatttattcataaaaaagtcatcaaacct
tatgtagatattgataagttagaaggcaaagttattagctacaaaagcttacttatagag
tggtgtcagaaagaaaaaagggtatttcattacgatatttatgaagatgaagatgcaggg
aaactaaaatattttggtgtaaaactaagtattgatggtaaagttgttgcaaaagcccga
gccacatcaaaaaagaaggcagaagaaattgcctctaaaagagggtattttgtattccag
tcagaaatagacggaaaataa

DBGET integrated database retrieval system