Flavobacterium psychrophilum V4-24: IA04_00900
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Entry
IA04_00900 CDS
T03660
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IA04_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpw03019
]
IA04_00900
03009 Ribosome biogenesis [BR:
fpw03009
]
IA04_00900
03036 Chromosome and associated proteins [BR:
fpw03036
]
IA04_00900
Enzymes [BR:
fpw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IA04_00900
Messenger RNA biogenesis [BR:
fpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IA04_00900
Ribosome biogenesis [BR:
fpw03009
]
Eukaryotic type
90S particles
RNase
IA04_00900
Prokaryotic type
rRNA processing factors
IA04_00900
Chromosome and associated proteins [BR:
fpw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IA04_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DUF7515
Motif
Other DBs
NCBI-ProteinID:
AIG35931
UniProt:
A0A076NSN3
LinkDB
All DBs
Position
204102..204842
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AA seq
246 aa
AA seq
DB search
MSFIKKIFLSSRSSEDGLFFSKLEKILGFKPLNLTHFRRAFTHRSMNKLDEKGNPMNYER
LEFMGDAMLGSVIAAHLFNMSPTGDEGYLTKMRSKIVSREHLNELGKDLNLIQFLESKVT
LQNFGENIHGNLFEAFVGAIYLDRGFVYCEKFIHKKVIKPYVDIDKLEGKVISYKSLLIE
WCQKEKRVFHYDIYEDEDAGKLKYFGVKLSIDGKVVAKARATSKKKAEEIASKRGYFVFQ
SEIDGK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagttttattaaaaaaatatttttaagttcccgttcttcagaggacgggctttttttt
agtaaactcgaaaaaatattaggatttaaacctttaaatcttactcattttcgcagagcc
tttacccatcgatcaatgaataagttagatgaaaaaggaaatccaatgaattatgagcgg
ctagaatttatgggcgatgctatgctgggaagtgttattgcagctcatttatttaatatg
tctcctacaggcgatgaaggatatttaactaaaatgagatctaaaattgtaagtcgtgaa
cacttaaacgaattaggaaaagatcttaatctgatacagtttttggaaagcaaagtaaca
cttcagaattttggagaaaacatacacggcaatctttttgaagcttttgttggagcgatt
taccttgatagaggttttgtgtattgcgagaaatttattcataaaaaagtcatcaaacct
tatgtagatattgataagttagaaggcaaagttattagctacaaaagcttacttatagag
tggtgtcagaaagaaaaaagggtatttcattacgatatttatgaagatgaagatgcaggg
aaactaaaatattttggtgtaaaactaagtattgatggtaaagttgttgcaaaagcccga
gccacatcaaaaaagaaggcagaagaaattgcctctaaaagagggtattttgtattccag
tcagaaatagacggaaaataa
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