Flavobacterium psychrophilum V4-24: IA04_01235
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Entry
IA04_01235 CDS
T03660
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IA04_01235
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpw01007
]
IA04_01235
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpw03016
]
IA04_01235
03029 Mitochondrial biogenesis [BR:
fpw03029
]
IA04_01235
Enzymes [BR:
fpw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
IA04_01235
Amino acid related enzymes [BR:
fpw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IA04_01235
Transfer RNA biogenesis [BR:
fpw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IA04_01235
Prokaryotic type
Other AARSs
IA04_01235
Mitochondrial biogenesis [BR:
fpw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
IA04_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
MTH865
Motif
Other DBs
NCBI-ProteinID:
AIG35992
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All DBs
Position
279821..281572
Genome browser
AA seq
583 aa
AA seq
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MYRSHNCGELNATHINKEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLMFDESRSDKTVF
ELAKTLGREFVIQVKGTVIEREAKNKNISTGEIEILVTQMTILNSSLTPPFTIEDETDGG
EDIRMKYRYLDIRRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNIFEGLTRHLLKELKGIEVEKFPRMTYNHAMKTYGNDKPDIRFGMEFGELNE
YAKHKDFPVFNAAELVVAIAVPGVGEYSRKEIDALIEWVKRPQVGASGMVYVKCNEDGTY
KSSVDKFYDQGDLSHWAKTTGAKAGDMIFVLSGPADKTRAQLSALRMELATRLGLRNPAE
FAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDMHLLETDPKSVRANAYDMVLNGNEI
GGGSIRIHDKNTQALMFKYLGFTEEEAKNQFGFLMDAFQFGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPSIIDDSQLKELHIQLDLK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaagtcataattgtggcgaattaaacgctacgcatatcaataaagaagttaca
ctagcaggttgggttcagaaatctcgtgataaaggatttatgaattgggtcgatttgcgt
gaccgttacggaattacgcagctcatgttcgacgaaagtcgctctgataaaacagttttc
gaactcgcaaaaacattgggtcgtgaatttgtaattcaagtaaaaggaaccgttatagaa
cgtgaggccaaaaacaaaaacatctcaacaggtgagatagaaattttagttacccaaatg
actatcctaaacagctcgctaacgccgccgtttacaattgaagacgaaacagatggcggt
gaagatattcgtatgaaataccgttaccttgatattagacgaaatcctgtaaaaaacagc
ttgctttttcgtcataaagtagctatggaagtgcgcaaatacttatcggatttagatttt
tgtgaagtagaaacaccgtatttaattaaatctacgccagaaggagcaagagattttgta
gtgccatctcgaatgaacgagggacaattttacgcccttccgcaatctccacaaacattc
aaacaattattgatggtgggtggtatggataaatattttcaaatcgtaaaatgtttccga
gatgaagatttacgtgccgaccgtcagccagaatttacacaaatagattgcgaaatggcc
ttcgtagaacaagaagatattttgaatatttttgaaggactaacacgccatttgctcaaa
gaattaaaaggaatcgaagtagaaaaatttcctcgtatgacatataatcatgctatgaaa
acctacggaaatgacaaaccagacattcgtttcggaatggaatttggagaactaaacgaa
tatgcgaagcacaaagattttccagtgtttaatgctgccgaactggtcgttgcaattgca
gttcccggagtaggcgaatattctagaaaagaaatagacgcacttatagaatgggtaaaa
cgtccacaagtaggcgcatcaggaatggtttatgtaaaatgtaacgaagatggaacctat
aaatcatcagtcgataaattttatgaccaaggcgatttgagccattgggcaaaaacaaca
ggtgcaaaagcaggagatatgatttttgtactctccggcccagccgacaaaactagagcg
caactctctgcattaagaatggaattagcaactagacttggcttaagaaaccccgcagaa
tttgcaccactttgggtagtcgattttccactattagaattcgatgaagaatcaggtcgt
taccatgcaatgcaccacccatttacctcgccaaaaccagaagacatgcacttgttagaa
accgacccaaaatctgttcgtgccaatgcttacgatatggtcctcaacggaaacgaaata
ggcggaggttctatcagaattcatgataaaaatacgcaagcattaatgtttaaatactta
ggatttaccgaagaagaagccaaaaatcagttcggattcctaatggacgcattccagttt
ggagcacccccacacggaggactagctttcggattagatagattagttgcaattttagga
ggtcaagaaactattcgcgattttattgcttttccgaagaataattcaggaagagatgta
atgattgatgcaccgtctattattgatgatagtcagttaaaagagctgcatattcaacta
gatttaaaatag
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