Flavobacterium psychrophilum V4-24: IA04_02050
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Entry
IA04_02050 CDS
T03660
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00730
Thiamine metabolism
fpw01100
Metabolic pathways
fpw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
IA04_02050
Enzymes [BR:
fpw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
IA04_02050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIG36137
UniProt:
A0A076NXF1
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Position
464680..466503
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AA seq
607 aa
AA seq
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MNNEEKISRTPFPNSKKVYIDGEIHSIKVAMREISLADTKMSNGRIEKNPSVTVYDTSGP
FTDPNIEIDIRKGLPRIREQWILDRNDVEELTEITSEYGKLRLNDEKLNNLRFEYLHKPM
RAKKGTNVSQLYYAKQGIITPEMEYIAIRENQRIEQINAQSKEMQCQHAGHSFGANTPKS
KITPEFVRSEVARGRAIIPNNINHPESEPMIVGRNFLVKINANIGNSAVTSSIEEEVEKA
VWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGIAEDLTWEVFR
DTLIEQAEQGVSYFTIHAGVLLRYIHLTANRVTGIVSRGGSIMAKWCLFHHKENFLYTHF
EDICEIMKQYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWKHDVQVFIEGPG
HVPMHMIKENMDKQLEHCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGCAMLCYV
TPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGSQYRDNALSKARFEFRWEDQFNLS
LDPDTAREFHDETLPADGAKVAHFCSMCGPKFCSMKISQEIRDVAEAERGMKEKSEEFAV
QGSEIYS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaagaaaaaatttcaagaactccatttccaaactcgaaaaaagtatatata
gacggagaaattcattcgataaaagtagccatgagagaaatttcacttgccgatactaaa
atgtcaaatggtcgaatagaaaaaaatccatcagttactgtttacgatacttcaggtcca
tttaccgacccaaatatcgaaatagacattcgtaaaggattaccccgcattcgcgaacaa
tggattttagatcgaaatgacgtagaagaattaaccgaaattacttccgaatacggaaaa
ttacgcctaaatgatgagaaactaaacaatttgcgtttcgaatatttgcacaaaccaatg
cgtgccaaaaaaggaactaatgtttcccaattgtattacgcaaaacaaggtattattacc
cccgaaatggagtatattgccattcgtgaaaaccaacgcatcgagcaaattaatgcccaa
tctaaggaaatgcaatgtcagcacgcaggtcatagttttggagccaacaccccaaaatct
aaaataaccccagaatttgttcgtagcgaagtggctaggggtcgtgctattattccaaat
aatataaaccatcccgaaagcgaacctatgattgtaggacgtaacttcttggtaaaaata
aatgccaatataggaaacagcgcagtaacgtcaagtatcgaagaggaggtagaaaaagca
gtttgggcttgccgctggggagccgatactattatggatttatcaactggaaaaaacatt
catgaaaccagagaatggattattcgcaattcgccagtccctattggcacggtgcctatt
taccaagcgctagaaaaagtaaacggaatcgccgaagatctaacttgggaagtatttcgt
gataccttaatcgaacaagccgaacaaggcgtttcttattttaccattcacgcaggggtt
ttattgcgctatattcatctaacagctaatagggttacaggaattgtttcgcgtggtggt
tctatcatggcaaaatggtgtttgtttcaccacaaagagaacttcttatatactcatttc
gaagatatttgcgaaattatgaagcagtatgatgttgccttttcattaggcgacggattg
cgtcctgggtctattgccgatgctaatgatgcggcacaatttgcagaattagaaacctta
ggcgagctaacaaaaattgcttggaagcatgatgtacaagtatttattgaagggcctggt
cacgtacccatgcacatgattaaagaaaacatggacaaacaactggaacattgcgacgaa
gctcctttttatactctagggccattaacaacagatattgctcctggttacgaccacatt
acttctgctattggagcagccatgataggttggtacggttgcgctatgttgtgctatgta
actcccaaagaacaccttggtttacctaacaaaaaagatgtaaaagacggtgtgattact
tacaaaattgccgcacatgctgccgatttggctaaaggtcatcctggttcgcaataccga
gacaatgccttgagtaaagcccgtttcgaattccgttgggaagaccaatttaatttatct
ttagatccagatactgctcgtgaatttcatgacgaaaccttacctgccgacggagcaaaa
gtggctcatttttgctctatgtgtggaccaaaattttgttcgatgaaaatctctcaggaa
attcgtgatgttgccgaagccgagagaggaatgaaagaaaaatcagaagaatttgccgtg
caaggaagcgaaatttatagttaa
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