Flavobacterium psychrophilum V4-24: IA04_03595
Help
Entry
IA04_03595 CDS
T03660
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpw03009
]
IA04_03595
Enzymes [BR:
fpw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IA04_03595
Ribosome biogenesis [BR:
fpw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IA04_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
TRAM
PrmA
N6_N4_Mtase
PCMT
UPF0020
FtsJ
Methyltransf_12
NagA_C
Motif
Other DBs
NCBI-ProteinID:
AIG36423
LinkDB
All DBs
Position
complement(793077..794492)
Genome browser
AA seq
471 aa
AA seq
DB search
MGKKITDKIVFDTVKVLDAGAKGVSVAKAPDGKVIFISNVVPGDVVDVQTFKKRKAYYEG
KAIYFHEYSEHRTEPVCEHFGVCGGCKWQNMKYSQQLFYKQNEVFNNLKRIGKVEMPEFE
TILGSEKQFFYRNKMEFGFSNARWMTEAEIKSDQEFDDRNALGFHIPKMWDKILDITKCH
LQGDPSNAIRNEIRRFAIENNLEFFNPRNHEGLLRTLMIRTASTGEIMVLIQFFEENKVQ
RELIMNHLAETFPEITSLQYVINGKPNDTIYDQDIKLFKGRDYILEEMEGLHFSINAKSF
YQTNSEQAYELYKITRDFAGLTGNELVYDLYTGTGTIAQFVSKQAKKVIGVEAVPEAIAD
AKENAKRNNISNCEFFVGDMKNVFNDAFIAQHGHPDVIITDPPRDGMHADVVKQILSIGA
EKVVYVSCNSATQARDLALMDEMYQVTRVRPVDMFPQTHHVENVVLLEKRK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaataacagacaaaatcgtctttgatacggtaaaagtccttgatgcgggt
gcaaaaggcgtttcggtggcgaaagctcctgatggtaaggtgatttttatatctaatgtc
gtgcctggcgatgtggtagatgtgcaaacttttaagaagcgaaaggcttattatgagggg
aaagccatttattttcatgaatattctgaacacagaacggagcctgtttgcgaacatttt
ggggtttgtggcggttgcaaatggcagaatatgaagtattcgcaacaattattttacaaa
cagaatgaggtttttaataacttgaaaagaattggaaaggtagaaatgcctgaatttgaa
actattttagggtctgaaaaacaatttttttatagaaataaaatggagtttggtttttcg
aacgctcgttggatgaccgaagccgaaataaaaagtgatcaggagtttgatgaccgaaat
gcgttgggttttcatattccgaaaatgtgggataagattttagacattacaaaatgtcat
ttgcaaggggacccgtcgaatgcgattaggaacgaaattcgtcgttttgcgatagaaaat
aatttagaattttttaatcctagaaatcacgaaggtttgcttagaacactgatgattcgt
acggcttcgactggcgaaatcatggttttaattcagttttttgaagaaaacaaagtgcaa
cgtgagctgattatgaatcatttggctgaaacttttccagaaattacttcattgcaatat
gtgattaatgggaaaccaaatgatacgatttatgaccaagatataaaattatttaaaggt
cgtgattatattttggaagaaatggaaggtttgcattttagtataaatgccaaatctttt
taccaaactaattctgaacaagcttacgaattgtacaaaataactagagattttgctgga
ttaacaggaaatgaactcgtgtacgatttgtatactggaacgggaactattgcgcagttt
gtttcgaaacaagccaagaaagtaattggtgttgaagctgttcctgaagctattgctgat
gctaaagaaaatgcaaaacgcaataatattagcaattgtgagttttttgtaggtgatatg
aaaaatgtttttaatgatgcttttattgcgcaacatggtcaccctgatgtaattattacc
gatccgcctcgtgatggtatgcatgctgatgtggtaaaacaaatcttatctattggggcc
gaaaaagtagtctatgtaagttgtaattcggcaacgcaagcccgtgatttggctttgatg
gacgaaatgtatcaagtaactcgtgtacgcccagttgatatgtttccgcaaacccatcat
gtggagaatgtagtgcttttagagaaaagaaaataa
DBGET
integrated database retrieval system
