Flavobacterium psychrophilum V4-24: IA04_03660
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Entry
IA04_03660 CDS
T03660
Name
(GenBank) Clp protease ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fpw03110
]
IA04_03660
Chaperones and folding catalysts [BR:
fpw03110
]
Heat shock proteins
HSP100
IA04_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
Sigma54_activat
AAA_16
nSTAND3
AAA_22
AAA_18
RuvB_N
TniB
IstB_IS21
Zeta_toxin
AAA_7
AAA_14
UVR
AAA_3
RsgA_GTPase
DUF815
Torsin
Roc
DNA_pol3_delta2
AAA_25
SLFN-g3_helicase
ATPase_2
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIG36436
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All DBs
Position
complement(804772..807327)
Genome browser
AA seq
851 aa
AA seq
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MDDNFSPRVKDVITYSKEEALRLGHDFIGTEHLMLGMLRDGNGTAISILNNLSIDLNHLR
RKVETLSPANPNVIVSNNKKNLHLTRQAERALKTTFLEAKVFQATSISTAHLLLCILRNE
NDPTTKLLNKLQIDYDVAKEQYLNMTPTNNEEDFQDNFPKNESSYGDDSGQDDSIKADNF
SNPANKSNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVSQILSRRKKNNPLLI
GEPGVGKSAIAEGLALRIIQKKVSRILFGKRVVTLDLASLVAGTKYRGQFEERMKAVMNE
LEKNNDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKD
GALERRFQKVIVEPTSVEETITILHNIKDKYEDHHNVTYTDEAIEACVKLTDRYMSERFL
PDKAIDALDEAGSRVHITNIDVPKKILELERQLEEVRELKNSVVKRQKYEEAAKLRDDEK
KLEKDLAIAQEEWDDDAKNNKIIVSEDNVADVVSMMTGIPVNRIAQTESNKLAHLPELIQ
NKVIGQNEAVLKIARAIQRNRAGLKDPNKPIGSFIFLGQTGVGKTQLAKILAKELFDSED
ALVRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYCVVLLDEIEKAHPDVF
NMMLQVLDDGYMTDSLGRKIDFKNTIIIMTSNVGARQLKDFGQGVGFGTAAKVSQADDNS
KSIIENALKKTFAPEFLNRIDDVIVFNALEKEDINSIIEIELNKLYARVKELGYSLSLSD
KAKAYVAEKGFDRQFGARPLKRAIQKYVEDVLAEEIITSKIASGDEIFMDFEEGETELKV
SIRKKTEEPTS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttttcaccaagagtcaaagatgtaattacttatagcaaagaagaagcc
ttacgtttgggtcacgattttattggtaccgaacatttaatgcttggtatgctacgtgac
ggaaatggtacagcaatttctatattaaacaatctttctatcgatttaaatcatttgcgt
agaaaagtagaaacactaagccctgcaaatcctaacgtaattgtaagcaacaataagaaa
aatttgcaccttacaagacaagccgaaagggctctaaaaactacttttctagaagctaag
gtttttcaagctacatcaataagtactgcacatttgctgttatgtattttgcgtaacgag
aatgacccaactactaaattgcttaataaattacaaattgactacgatgtagccaaagaa
caatatttgaatatgacaccaacaaataacgaagaagattttcaagataattttcctaaa
aacgaatcttcctacggagatgattcaggacaagatgacagtataaaagcagataatttc
agtaatcctgccaacaaatcgaataaaaaatcgaaaacacccgttttagacaatttcggt
agagatttaaccgaaatggcagaagaaggaaaactagatcctgttgtgggtcgtgaaaaa
gaaatagaacgtgtttctcaaattttaagtcgaagaaaaaagaataaccctttacttata
ggggaacctggtgtgggaaaatctgctattgccgaaggtttagctttgcgcattatacaa
aaaaaagtttctagaatattattcggaaaacgtgttgtaaccctagatttagccagcctt
gtagccggcacaaaataccgaggacaatttgaagagcgcatgaaagccgtaatgaacgaa
ctcgaaaaaaacaatgatattatcctttttatcgatgaaattcataccatagttggcgct
ggcggtgccactggctcgttagatgcttctaatatgtttaaacccgctttggctcgtggc
gaaattcaatgtattggagctacaacactcgacgaataccgtcaatatatagaaaaagat
ggcgctttagaaagacgctttcagaaagtaattgtcgaaccaacttcggttgaagaaacc
attaccatcttacataatattaaagataaatatgaagaccatcataatgtaacttacacc
gatgaagccatcgaagcttgtgtaaaactaacagatcgttatatgtctgagcgattttta
ccagacaaagcgatagatgctcttgacgaagctggttctcgtgtgcacatcacaaacatt
gatgttcctaaaaaaattctagaattagaacgccaattagaagaagttcgtgaactaaaa
aattcagttgtaaaaagacaaaaatatgaagaagcagccaagcttcgtgatgatgagaaa
aagctagaaaaagacctagccattgctcaggaagaatgggatgatgatgctaaaaataac
aaaattatagtatccgaagataatgttgccgatgtggtttctatgatgacaggaattcct
gtaaatcgtattgcacaaaccgaaagcaataaactagcccatttaccagaacttattcaa
aataaagtaatcggacaaaacgaagcagtactaaaaattgctcgtgcaatacaacgaaat
cgtgctggattgaaagatccaaacaaacccattgggtcctttattttccttggacaaact
ggtgttggaaaaacacaattagccaaaattttagccaaagaattattcgattctgaagat
gcactagttcgtatcgatatgagtgaatatatggaaaaattcgctgtttctcgtctagtt
ggagcgcctccagggtatgttggttacgaagaaggcgggcaactaacagaaaaagtgcgt
cgtaaaccgtattgtgtggtattattagacgaaatcgaaaaagcacacccagatgttttt
aacatgatgctacaagtacttgacgatggctatatgacggatagtttgggacgaaaaatc
gattttaagaacacaattatcatcatgacttctaacgttggagctagacaattgaaagat
tttggtcaaggagttggttttggcactgctgccaaagtttcgcaagcagatgataactcg
aaaagcattatcgaaaacgcactaaagaaaacatttgcaccagaatttttaaacagaatt
gacgatgttattgtatttaatgctttagaaaaagaagatatcaactcgattatcgaaatt
gaattaaacaaattatacgcacgagttaaagaattaggctactccctttctttatcagac
aaagcaaaagcttatgttgccgaaaaaggatttgacagacagtttggtgctcgtccgcta
aaaagagccattcaaaaatatgtagaagatgtgctggctgaggaaattatcacctcaaaa
attgcttctggagacgaaatatttatggattttgaagaaggagaaactgagttaaaagtt
agcattcgaaaaaaaactgaagaaccaacaagttga
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