Flavobacterium psychrophilum V4-24: IA04_04120
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Entry
IA04_04120 CDS
T03660
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IA04_04120
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpw01007
]
IA04_04120
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpw03016
]
IA04_04120
Enzymes [BR:
fpw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
IA04_04120
Amino acid related enzymes [BR:
fpw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IA04_04120
Transfer RNA biogenesis [BR:
fpw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IA04_04120
Prokaryotic type
IA04_04120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
B_lectin
Motif
Other DBs
NCBI-ProteinID:
AIG36514
LinkDB
All DBs
Position
complement(914165..916111)
Genome browser
AA seq
648 aa
AA seq
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MIKITLPDGSIKEFENGVTPMDVAKSISEGLARNVISAAFNNITVEISTELTTDGSLVLY
TWNDKDGKKAFWHSTSHVMAQVLEEMYPGLKLTLGPAIDNGFYYDVDFGDTKIVEADFKK
IESRILEISKEKHEFKLRPVTKADALELYKDNEYKFELISNLEDGTITFCDHATFTDLCR
GGHIPNTGIIKAVKIMSIAGAYWRGDEKNKQLTRVYGTSFPKQKDLTDYLELLEEAKRRD
HRKLGKELELFAFSQKVGQGLPLWLPKGAALRDRLEQFLKKAQKKGGYEQVVTPHIGQKE
LYVTSGHYAKYGADSFQPISTPTEGEEFLLKPMNCPHHCEIYNVRPWSYKDLPKRYAEFG
TVYRYEQSGELHGLTRVRGFTQDDAHIFCTPDQLDEEFKKVIDLVLYVFGSLGFENFTAQ
ISLRDKENRDKYIGSDENWEKAENAIINAARDKNLNTVVEYGEAAFYGPKLDFMVKDALG
RSWQLGTIQVDYNLPERFELTYKGSDDQLHRPVMIHRAPFGSMERFIAILLEHTAGNFPL
WLMPEQAIILCLSDKYEIYAKKVLNLLENHEIRALIDNRNESIGRKIRDAEMQKTPFMLI
VGEEEEKNNTISIRRHGQEGKGNITVTIEEFARIVNDEISKTLKTFEV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgattaagattacattacctgatggttcgattaaagagtttgagaatggcgtaactcct
atggatgttgctaaaagtattagtgaaggtttggctagaaatgtgatttcggcagctttt
aataatattacggtggagatttcgacggaattgaccacggatggttctcttgttttgtat
acttggaatgataaggacggaaagaaggctttttggcattcgacttcgcatgtcatggcg
caagttttggaggagatgtatcctggtttgaagttgactcttggtcctgcaatagataat
ggtttttattatgatgtagattttggtgatactaaaattgtggaagctgattttaagaaa
atagagagtcgtattttagagatttcgaaagaaaaacatgagtttaaattgcgtcctgtt
actaaggctgatgctttggaactttataaagataatgaatataagttcgagttgatttcg
aatctggaagatggtacgattactttttgtgatcatgctacttttaccgatttgtgtcgt
ggtgggcatattccgaatactgggattataaaagctgtaaagatcatgagtattgctggt
gcttactggcgtggcgatgaaaaaaacaagcaattgactcgagtttacggaacttcgttt
ccaaaacaaaaagatctgactgattatttagagttactggaagaggcaaaacgtcgtgat
catagaaaattaggtaaagaattagaattatttgctttttcacagaaagttggtcaaggt
ttgcctttgtggttgcctaagggtgctgctttgcgtgatcgcttggagcagtttttgaaa
aaagctcagaaaaaaggtggttacgagcaagtggtgactccgcatattgggcagaaagaa
ttgtatgttacttctggtcattatgcaaaatatggagctgatagttttcaacctatttcg
actcctaccgaaggtgaagagtttttattgaaacctatgaactgcccgcaccactgtgaa
atatataatgtaagaccttggtcttataaggatttgcccaagcgttatgctgaatttggt
accgtatatagatatgaacaaagtggagaattgcacggtttaactcgtgttcgtggattt
acacaagatgatgcgcatattttttgtacaccagatcagttagatgaggaatttaaaaaa
gtaattgacctagtattatatgtgtttggttcgttaggatttgaaaatttcacagctcaa
atatcattaagagacaaagaaaatagagataagtatataggtagcgacgaaaattgggaa
aaagctgaaaatgcgattatcaatgcggcacgtgataaaaatttgaatactgttgtagaa
tatggtgaagcggctttttatggtcctaagcttgactttatggttaaagatgctttgggt
agaagctggcaattaggaaccattcaggtagattacaacttacccgaacgcttcgaattg
acctacaaaggttctgatgatcagttacacagacctgtaatgattcaccgtgctcctttt
ggttcgatggaacgatttatagccattttattagaacatacagcaggaaatttccccctt
tggctcatgccagaacaagctataatattgtgtttgagtgataaatatgaaatatatgcg
aaaaaagttttaaatctgctagaaaatcacgaaattcgcgccctaattgataacagaaac
gaatcgattggaagaaaaattagagatgcagaaatgcaaaaaaccccgtttatgctgatt
gtaggcgaggaagaagagaaaaataataccatttctatacgccgtcatgggcaagaagga
aaaggaaatattacggttacaatagaagaatttgctagaattgtaaacgacgaaataagc
aaaacattaaaaacatttgaagtttaa
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