Flavobacterium psychrophilum V4-24: IA04_04250
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Entry
IA04_04250 CDS
T03660
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fpw03000
]
IA04_04250
Transcription factors [BR:
fpw03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IA04_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR
HTH_24
Rrf2
HTH_69
MarR_2
HTH_11
Sigma70_r4
DnaD_N
HTH_6
GntR
HTH_Tnp_Tc3_1
DNA_pol_B_palm
HTH_29
HTH_Cmi2_C
TrmB
HTH_38
SNF2-rel_dom
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AIG36537
LinkDB
All DBs
Position
complement(941241..941867)
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AA seq
208 aa
AA seq
DB search
MNKNLKKLFPSFSNTLIEDINANAIDQSFVVGDVVMRTGQYIKNTILVLSGSIKIYREDA
DGGEFFMYYLQPGQACAISMICATKNEQSQIMAKVVEDTELVMVPLTLMNKWMMEHRSWY
EFVIDTYRSRFEEVLEVVNSIAFKAMDERLEFYLKRHKDTCGCLNLKLSHQEIATDLNTS
REVISRLLKKLEQRGVLKLQRNHIEFLK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatcttaaaaaactatttccatcgttttcaaatacactaatagaagatata
aatgctaatgcaatcgatcaatcttttgtagtaggagatgttgtaatgagaacaggtcag
tacatcaaaaatacgatattggttttaagcgggagcataaaaatttatcgtgaagacgct
gatggtggtgagtttttcatgtattatttgcagccagggcaagcttgtgcaatttctatg
atttgtgctacaaaaaatgaacaaagccaaataatggcaaaagttgttgaagacacagaa
ttagttatggtacccttaacccttatgaacaagtggatgatggaacaccgcagttggtac
gaatttgttattgatacatacagaagtcgttttgaagaagttttagaagtagtaaacagt
attgcctttaaagcaatggatgaacgtttggagttttatttaaaacgccataaagatact
tgcggttgcctaaatttaaaattatcgcatcaggaaattgctaccgatttaaatacctca
cgagaagttatttctcgattattaaaaaaattagaacaacgtggagtattaaaattacaa
cgaaatcatatcgaatttttaaaataa
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