Flavobacterium psychrophilum V4-24: IA04_04685
Help
Entry
IA04_04685 CDS
T03660
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpw03400
]
IA04_04685
Enzymes [BR:
fpw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IA04_04685
DNA repair and recombination proteins [BR:
fpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IA04_04685
Prokaryotic type
IA04_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
AIG36619
LinkDB
All DBs
Position
1041851..1043137
Genome browser
AA seq
428 aa
AA seq
DB search
MNIFWFRRDLRLDDNVGLFHALNSDQTILPIFIFDYNILSQLSKDDARVTFIHELLSKMQ
KKLQEKGKSLAVFYGKPSEIFEKLISENKVKTIYTNHDYEPYARKRDKELNQLFANHNIQ
FLTSKDQVIFEKSEVTKDDGKPYIVYTPYTNKWKEKFKQTTLKNYNSENYLDKIVTHPYP
FLSLESIGFETSKITVASYDISENLIDNYEATRNFPSLNKTSFLGIYLRFGAVSVRKMMQ
EAIKSKNETFFKELIWREFFMQILWHFPHTINKSFKEKYDAIIWENKEDLFQKWCQGKTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGETYFATKLLDYEQSSNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDKDLKYIKKWIPELQTSHYPEPIVEHKFARERCL
KVYKEAVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattctggttccgccgtgatttgcgattagatgataatgtaggattatttcat
gctctaaatagtgaccaaactattttgcccatcttcattttcgattataacatactctcg
caactatctaaagatgatgctcgtgttacttttattcacgaactattatctaaaatgcaa
aaaaaattacaagaaaaaggaaaatcgttagctgttttttacggaaaaccatcagaaatt
ttcgaaaaactaatttccgaaaataaagtaaaaacaatttacacaaaccacgattacgaa
ccctacgctcgcaaacgagataaagaactaaaccagctatttgcaaaccataacatacaa
ttcctaaccagcaaagaccaagttattttcgaaaaaagtgaagtcacaaaagatgacgga
aaaccctatatagtttacacaccatatactaacaaatggaaagaaaaatttaagcaaaca
accctaaaaaattataattccgaaaattatttagacaaaatcgttacacacccctaccct
tttctaagcctagaatcgataggatttgaaacatcaaaaataaccgtcgcatcctatgat
atatcagaaaatttaatagataattacgaagctacaagaaatttcccctcactaaataaa
acttcatttctaggtatttatcttcgtttcggagccgtttctgtcagaaaaatgatgcag
gaagccatcaaaagtaaaaacgaaactttttttaaagaacttatttggagagaatttttt
atgcaaatattatggcatttcccacacaccataaataaaagttttaaagaaaaatatgat
gccattatttgggaaaataaagaagatttattccagaaatggtgccaaggaaaaacgggt
tatccctttgtagatgcaggaatgagagagcttaatgcaactggacacatgcacaataga
gtacgcatgatagtggccagttttttatgcaaacatttactaatagattggcgctgggga
gaaacttattttgccacaaaacttttagattacgaacaatcaagtaatgtaggcaactgg
caatgggcggctggttctggtgtagatgcagcaccctattttagaatttttaatcccaca
gaacaaataaaaaaattcgacaaagacttaaaatacatcaaaaaatggattcctgaattg
caaacctctcattatccagaaccaatcgtagaacacaaatttgcaagagaacgctgctta
aaagtttataaagaagccgtaggatag
DBGET
integrated database retrieval system
