Flavobacterium psychrophilum V4-24: IA04_04815
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Entry
IA04_04815 CDS
T03660
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IA04_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpw03400
]
IA04_04815
Enzymes [BR:
fpw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IA04_04815
DNA repair and recombination proteins [BR:
fpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IA04_04815
Prokaryotic type
IA04_04815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIG36644
UniProt:
A0A7U2RLH6
LinkDB
All DBs
Position
complement(1071430..1072092)
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AA seq
220 aa
AA seq
DB search
MINANSWLGFFEIEKEKPYFEDLMKTIDQEYENYSCFPAKDLIFNAFNFCDFTNLKVVII
GQDPYHGVGEANGLCFSVNDGVKIPPSLKNIFAEINAEYDLVFSPTSGNLESWAKQGILL
LNASLTVRKDLANSHKHLKWNVFTDAVIEYVSTHSQRVVFLLWGSFAHKKGRKIDRERHL
VLESGHPSPLSANRGFWFGNNHFRLTNEYLKLNGFSEIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgctaattcttggttgggtttttttgaaattgaaaaagagaagccttatttt
gaagatttaatgaaaactattgatcaagaatatgaaaattattcttgttttcctgcaaag
gatttgatttttaatgcttttaatttttgtgattttacaaatttgaaggtggttattatt
ggtcaggatccttatcatggggttggggaagctaatggtttgtgtttttctgtaaatgat
ggtgtaaaaattccgccttcgttaaagaatatttttgctgaaataaatgctgaatatgat
ctagttttttcgccaacttctggtaatttagagtcttgggcaaagcaaggaattttactt
ttaaatgcttccttaacggttcgtaaggatttggctaacagccataaacatttgaaatgg
aacgtttttaccgatgctgttatcgagtatgtttctactcattctcaacgggttgttttc
ttgctttggggtagttttgcgcacaagaaagggcgtaaaatagatagggaaaggcatttg
gttcttgaatctggacatccttcgccattgagtgctaatcgtggtttttggtttggaaat
aatcattttaggttaaccaatgagtacttaaaattgaatggtttttctgaaattgaatgg
taa
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