Flavobacterium psychrophilum V4-24: IA04_04820
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Entry
IA04_04820 CDS
T03660
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IA04_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpw03400
]
IA04_04820
DNA repair and recombination proteins [BR:
fpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IA04_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
TetR_C_8
zf-CCCH_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIG36645
UniProt:
A0A075SCG9
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All DBs
Position
1072201..1074366
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AA seq
721 aa
AA seq
DB search
MISITEKTLQDLQFSTVLETVSSICNTDIGAAKALEITPFKDEETMMTALHQTSEYIASF
QNNNAIPNHGFDAITYEIKFLGIEDSFLEVGSFRKIATLSENTNVLLQYFKKFEDYYPNL
YKKSSQIELTKYIISSIADVVDKYGEIKDNASPNLLEIRRDMNLVRGKVNQSFGMALTQY
NSLGYLDDIKESFVNNRRVLAVLAMYRRKVKGTILGSSKTGSLAFIEPEATLRYSRELSN
LEYEEKEEITRILKLLTNIIRPYLPLLIQYQDFLSDIDVIAAKAKYANRINGILPKITKE
RRIYFRDAYHPILYLTNKGKNEITHPQTIEFDSKNRIIVISGPNAGGKTISLKTVGLLQL
MLQSGMLIPVHERSETCLFDRILTDIGDNQSIENHLSTYSYRLKNMNYFLKKCNAKTLFL
IDEFGTGSDPDLGGALAEIFLEEFYHREAFGIITTHYTNLKILANELPFATNANMLFDEK
SLEPMYKLALGQAGSSFTFEVAQKNGIPFGLINRAKKKIETGKVRFDKTIANLQKERSKM
EKTSINLKEEETKAREESKKMETINAKVKQKLENYQELYDSNQKTIYLGQKIEALSEKYF
NNKNKKELLGEFLKVVEIENSKRIKATKTEIKAIAEKKKVIIEEVTVQVEEIRKEKKEKK
LKANLVPEKVKVILKIGDRVRMLDGKSVGTIDKIEKNKAIVNYGVFTSKVNLEALEFVQP
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaattaccgaaaaaacccttcaagatttacaattttctactgttttagaaaca
gtttctagcatttgcaatactgatattggtgcagcaaaagccctagaaataacacctttc
aaagacgaagaaacaatgatgacagctttgcatcaaacctcagaatatatagcttctttt
caaaataacaatgccattcctaatcatggttttgacgccattacttatgaaataaaattt
ctaggcatcgaggatagtttcctagaagtaggaagttttcggaaaattgcaactttatct
gaaaacacaaatgttttacttcaatatttcaaaaaatttgaagattattatcctaattta
tataaaaaatcaagccaaattgaactcacaaaatacatcattagtagtatagccgatgta
gtcgataaatatggcgaaataaaagacaatgcttctcccaatttattagaaattcgtagg
gatatgaacctagttcgtggcaaagtaaatcaaagttttggcatggcactaacccaatat
aatagtttgggttatttagatgatattaaggaaagctttgttaataaccgtagggtttta
gcggtcttagctatgtatcgtcgcaaggtaaaaggaaccattttaggaagctctaaaaca
ggaagtttagcctttatagaacccgaagctacactaagatattcccgagaattaagtaat
ttagaatatgaagaaaaagaagaaataactagaattttaaaactattaactaatataatt
cgtccgtatttaccactactaattcagtatcaagattttttaagtgacatcgatgtaatt
gctgccaaagcaaaatatgccaacagaataaacggaattttgccaaaaataacaaaagaa
agaagaatatattttcgtgatgcctaccaccctattttgtatttaacaaataaagggaaa
aacgaaattacacatccgcaaaccatcgaatttgattctaaaaacagaattattgtaatt
tctggacctaatgctggaggaaaaactatttccttaaaaactgtaggactgctacaatta
atgttgcaatctggaatgctaattccagtgcacgaacgaagcgaaacctgcttatttgat
cgaattttaacagatattggcgacaaccaatcgattgaaaatcatttaagtacttacagc
tatcgattaaaaaatatgaactattttctaaaaaaatgcaatgcaaaaacattgttttta
atcgacgaatttggtactggttccgatcctgatttgggtggcgctttagcagaaattttc
ttagaagaattttaccatcgtgaagcttttggaattattacaacacattataccaatctt
aaaatactagctaatgaactgccatttgctacaaatgccaacatgctttttgacgaaaaa
tcactagaacccatgtataaattagctttaggacaagcaggaagttcctttacatttgaa
gtagctcaaaaaaatggcattccgtttgggttaataaatcgtgccaaaaagaagatagaa
actggtaaagttcgtttcgacaaaaccattgctaatttgcaaaaagaacgatctaaaatg
gaaaaaacttcaattaatctgaaagaagaagaaaccaaagcacgtgaagaaagcaaaaaa
atggagactataaatgcaaaagtcaagcaaaaattagaaaactaccaagaattatatgat
agtaaccagaaaaccatctatttagggcaaaaaatagaagccctttcagaaaaatatttt
aataataaaaataaaaaagaattacttggtgagtttttaaaagtggtagaaattgaaaat
tcaaaacgaataaaagccactaaaactgaaataaaagccattgccgaaaagaaaaaagta
attatagaggaagtaaccgttcaggttgaagaaattcgtaaagagaaaaaagaaaagaaa
ctcaaagcaaatttagtacctgaaaaagtaaaagtaatactaaaaataggcgatagagtt
agaatgctcgacggaaaatctgtaggtacaatagataaaatcgaaaaaaacaaagccatt
gtaaactatggtgtttttacatcaaaagtaaatttagaagctttagaatttgtacagcca
aaataa
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