Flavobacterium psychrophilum V4-24: IA04_05610
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Entry
IA04_05610 CDS
T03660
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw03030
DNA replication
fpw03430
Mismatch repair
fpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IA04_05610
03430 Mismatch repair
IA04_05610
03440 Homologous recombination
IA04_05610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpw03032
]
IA04_05610
03400 DNA repair and recombination proteins [BR:
fpw03400
]
IA04_05610
Enzymes [BR:
fpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IA04_05610
DNA replication proteins [BR:
fpw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IA04_05610
DNA repair and recombination proteins [BR:
fpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IA04_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF2779
Motif
Other DBs
NCBI-ProteinID:
AIG36782
UniProt:
A0A076P4J7
LinkDB
All DBs
Position
complement(1232503..1232985)
Genome browser
AA seq
160 aa
AA seq
DB search
MTFTAIDFETATAFHPCSVGIVTVQNGVIVDEFVTLIKPPNNQYSPFTIAVHGIRPRDTV
NAKSFLEVYPEIKKRLQNKTVVAHNESFDRNVLAKSMALYGLDYETLNISNRWECTLKIY
KAKGFKPTKLSDCCQEMNIKLNHHEALSDARACAKLYLLR
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgacatttactgccatcgatttcgaaactgcaaccgcatttcatccctgttcagtcggg
attgtaactgtacaaaatggtgttattgtcgatgaatttgttacgctaattaaaccgcca
aacaatcaatactctccttttacgattgccgtgcatgggatacgccctcgtgataccgtt
aatgcaaaatcgttcttagaggtatatccagaaataaaaaaacgccttcaaaataaaaca
gtagtagctcataatgaaagtttcgatcgcaacgtactggcaaaatctatggcactttac
gggctagattatgaaacgttaaatattagcaaccgttgggaatgcaccctaaaaatatac
aaagccaaaggatttaaaccaacaaaattaagtgattgttgccaggaaatgaatataaaa
ctaaaccatcacgaagccctgtctgatgctagagcttgtgcgaaattgtatttgttgcga
taa
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