Flavobacterium psychrophilum V4-24: IA04_06740
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Entry
IA04_06740 CDS
T03660
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpw03016
]
IA04_06740
Enzymes [BR:
fpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IA04_06740
Transfer RNA biogenesis [BR:
fpw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IA04_06740
Prokaryotic type
IA04_06740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIG36996
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All DBs
Position
1464219..1464971
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AA seq
250 aa
AA seq
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MRYFIEFAYNGTQYHGWQYQPNATSVQETLNKVFSTLLQEKIDIMGAGRTDAGVHAKQMY
GHFDTDISIDNAKFIHKANSFLPKDIVIFNIIPVHNQAHARFDATSRTYNYHISTYKNVF
TNNLAWYSSKKIDVIAMNEAAKVLLKFTDFKCFSKTNTDVNTYNCKITEAFWSIEKEQLI
FTITADRFLRNMVRAIVGTLINIGLHKITIENFIQIIESQNRENAGFSVPAHGLFLTNIE
YPYIKKDESI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttatagaatttgcttataacggaacacaatatcatggctggcaataccaa
cccaatgcgacatcagtacaagaaactttaaacaaagttttttcgacactactacaagaa
aaaatagatattatgggtgctggccgtactgatgctggtgtgcatgccaaacaaatgtat
ggtcattttgatactgatattagtatcgataatgcaaaatttattcacaaagccaattca
tttttacccaaagacattgtgatttttaatataattcccgttcacaatcaagcccatgcc
agatttgatgctacttcacgaacatacaactatcatatttcgacttacaaaaatgttttt
actaataatttagcttggtattcatcaaaaaaaatagatgtcattgccatgaatgaagcg
gcaaaagtattattaaaatttaccgattttaaatgtttttcgaaaacaaatacagatgta
aatacttataactgcaagataaccgaagcattttggagcatcgaaaaagagcaactcatc
tttaccatcacggccgacagatttttaagaaatatggtacgtgccattgtaggaacactc
ataaatattggtttacacaaaataacaatcgaaaattttatacaaataatcgaatctcag
aacagagaaaacgcagggttttcggttccagcacatggtttatttctcacaaatatcgaa
tacccgtatataaaaaaagatgaaagcatttga
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