KEGG   Flavobacterium psychrophilum V4-24: IA04_08195
Entry
IA04_08195        CDS       T03660                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fpw  Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:fpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fpw03016]
    IA04_08195
Enzymes [BR:fpw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     IA04_08195
Transfer RNA biogenesis [BR:fpw03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    IA04_08195
 Prokaryotic type
    IA04_08195
SSDB
Motif
Pfam: Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B_4 Lactamase_B PDEase_II
Other DBs
NCBI-ProteinID: AIG37256
UniProt: A0A076NZ47
LinkDB
Position
complement(1770542..1771447)
AA seq 301 aa
MNLTILGCYAATPRTFTNPTSQVLEIRNRLFLIDCGEGTQVQLRKNKIKFSAINHIFISH
LHGDHFYGLIGLISTFNLLNRNNNLTVYGPKGIQEIIKLQLKLSNSWPQYELHFVELTST
KSEIIFEDDKVIVKTIPLKHRVYTNGFLFQEKIKERKLNANAVQNYKIETCYFQNIKNGK
DITLEDGRIIPNSELTFDPETPKSYAFCSDTIYNESIIPVIKNVDVLYHETTFLESEAEL
AKKTMHSTAKEAARIALQANCKQLILGHYSTRYESIKLFKEEAQTIFLNTLLGDDGKFFK
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaatcttaccatattaggttgttatgcggccacgccaagaacatttacaaacccaact
tcgcaagtattagaaataagaaatagattatttttaatagattgtggcgagggaacacaa
gtgcaattgcgtaaaaataagattaagttttcagcaataaatcatatttttatttcccat
ttgcatggcgaccatttttatggattaataggactaatttctactttcaatttattaaat
agaaacaataatttaacagtttatgggccaaaaggaattcaggaaattataaaattacag
ttaaaattatctaattcttggccacaatatgaattgcattttgtagaacttacaagtact
aaatctgaaattatttttgaagatgataaagtaattgtaaaaacaattccattaaagcat
agagtttatactaatggttttttgtttcaagaaaaaataaaagagcgcaaactaaatgca
aatgcagttcagaattacaaaatagaaacctgttattttcaaaatataaaaaacggaaaa
gacatcactttagaagacggaagaattattcccaattctgaattaacattcgatccagaa
acgcctaaaagttacgctttttgttcagataccatatataatgagtcgattattcccgta
ataaaaaatgtagatgttttgtaccacgaaaccactttcctagagtcggaagcagaatta
gctaaaaagaccatgcactcgaccgccaaagaagctgctagaatagcactgcaagccaat
tgcaaacaacttattttagggcattattctaccagatacgaatcgataaaactctttaaa
gaagaagcgcaaaccatttttttgaacactcttttgggagatgacggcaaattttttaaa
ttgtaa

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