Flavobacterium psychrophilum V4-24: IA04_08790
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Entry
IA04_08790 CDS
T03660
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00280
Valine, leucine and isoleucine degradation
fpw00650
Butanoate metabolism
fpw00907
Pinene, camphor and geraniol degradation
fpw01100
Metabolic pathways
fpw01120
Microbial metabolism in diverse environments
fpw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IA04_08790
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IA04_08790
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IA04_08790
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IA04_08790
Enzymes [BR:
fpw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
IA04_08790
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AIG37367
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All DBs
Position
complement(1904879..1905745)
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AA seq
288 aa
AA seq
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MNQPIKIIECPRDAMQGIKAFIPTEKKVAYIQSLLRVGFDTIDFGSFVSPKAIPQMQDTV
EVLAQLDLSQTQSKLLAIIANTQGAQNASIYKEIKYLGFPFSISENFQMRNTHKTIAESL
VTLQEILHIADRTNKEVVTYISMGFGNPYGDPWNVEIVGEWTEKLANMGVKILSLSDTVG
SSTPEVISYLFSNLIPQYPNIEFGAHLHTTPNKWHEKIDAAYKAGCRRYDGAIQGFGGCP
MAKDDLTGNMPTEKILSYFTTQKQNTNTSPMSFESAYNEASKIFNLYH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaccaataaaaattatcgaatgccctcgtgatgccatgcaaggcatcaaagcg
tttattcctaccgagaaaaaagtagcctacattcaatcgcttttgcgagtaggtttcgat
accatcgattttggaagttttgtatccccaaaagccattccgcaaatgcaagacacggtc
gaagttttagcacaactcgatttatcgcaaactcaaagcaaattattagccattattgcc
aacacacaaggagcccaaaacgcatctatttataaggaaattaaatatctaggattcccg
ttttctatatcagagaatttccaaatgcgaaatacccacaaaaccattgcagaatctcta
gttactttacaagaaattttacacattgccgatagaacaaataaagaagtcgtaacctat
atttctatgggatttggtaatccttatggtgacccttggaatgtcgaaattgtaggcgaa
tggacagaaaaattagccaatatgggggtcaaaatcctttccttgtctgataccgtgggt
tcatctacaccagaagtaattagttatttattctcaaatttaataccccaatacccaaat
attgagtttggtgcccatttgcataccaccccaaacaaatggcatgaaaaaatagacgcc
gcctacaaagcaggttgtcgccgttatgatggagcaattcagggctttggcggttgccct
atggcaaaagacgatttaacgggaaatatgccaaccgaaaaaatattatcctattttacc
actcaaaaacaaaacacaaacaccagcccgatgagcttcgaaagtgcttataacgaagca
tcaaaaatattcaatttatatcattag
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