Flavobacterium psychrophilum V4-24: IA04_09730
Help
Entry
IA04_09730 CDS
T03660
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpw03009
]
IA04_09730
Enzymes [BR:
fpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
IA04_09730
Ribosome biogenesis [BR:
fpw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IA04_09730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIG37536
LinkDB
All DBs
Position
2104073..2104693
Genome browser
AA seq
206 aa
AA seq
DB search
MKMYFCKMTIHQHFIIHKPYGYLSQFKYELKRKKKLLGELYDFPEGIMAIGRLDEDSEGL
LLLTTDGKMSEIVRSKKVEKEYYVQVDGLITQEAIEKMKNGVEIGFEGTKYMTKPCKAFI
VNEIPNFGERGKKIRDERHGPTSWASIVVTEGKFRQVRKMTAAVGFPTLRLVRVRVGNIH
LGNLQAREVLETSDFSKINENINVKN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtatttttgcaaaatgacaattcaccaacattttatcattcataaaccttac
ggatatttatctcagtttaaatacgaattaaaacgcaagaaaaaacttttaggagaatta
tacgattttcctgaaggaatcatggcaattggtcggttagacgaagattcggaaggctta
ttactactaacaaccgatggcaaaatgagcgaaatagttcgtagcaagaaggttgaaaaa
gagtattatgttcaagttgatgggcttataacccaagaagctatcgaaaaaatgaaaaat
ggagtagaaataggtttcgagggtacaaaatacatgaccaaaccttgtaaagcttttatt
gtaaatgaaattcctaactttggcgagcgtggcaagaaaattagagacgaacgtcacgga
ccaacttcatgggcttctatcgtggtaaccgaaggaaaatttcgtcaagtaagaaaaatg
actgcagctgttggttttccaactttacgactggtaagagttcgtgtaggaaacatacat
ctaggcaatttgcaggcgagagaagttttagaaacgagcgatttttcgaaaataaatgag
aatatcaatgtcaaaaattaa
DBGET
integrated database retrieval system
