Flavobacterium psychrophilum V4-24: IA04_11000 Help Entry IA04_11000        CDS       T03660                                  Name (GenBank) RNA polymerase sigma54 factor   KO K03092   RNA polymerase sigma-54 factor Organism fpw  Flavobacterium psychrophilum V4-24 Pathway fpw02020   Two-component system fpw02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:fpw00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     IA04_11000  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     IA04_11000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:fpw03021]     IA04_11000 Transcription machinery [BR:fpw03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      IA04_11000 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID LacI SF3b1 MarR HTH_Crp_2 HTH_12 Crp Motif Other DBs NCBI-ProteinID:  AIG37762 UniProt:  A0A075RKH1 LinkDB All DBs Position complement(2378700..2380166) Genome browser AA seq 488 aa AA seqDB search MLKQFLNFKLSQKLSPQQIQLMKLIQLPTQAFEARLLEEMNENPALEGGDDQEEIYEKDE FDNNDDYDEYEDNDSIDSGDINIDEYLSNDETPDYKTQANNYSDDDDERESPLSAPVSFH QDLINQLNTFILTDDQRNIAEFLVGSIDDMGYIRRTIQDIVDDMAFTQGIYTDEKTVEKI LHIVHELEPSGVGARDLQECLLLQLKHKTPTESVALAMNIIQDQFEAFTKKHYDKLMLKF SVSREQLKNGIDEIERLNPKPGGAYTGSNKITEHVVPDFAIKIIDDELELTLNGRNAPEL HVSKDYQDMMKTYKDSKDKSNAQKDAVQFIKQKLDSAKWFIDAIKQRQETLYVTMNAIMH FQQEYFLDGDEANLKPMILKDIADMIGLDISTVSRVANSKYVDTPYGTKLIKEFFSEAMT NDQGEEVSTIEIKNILQTVIAEEDKNKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIP VARMRKKM NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt atgttaaagcagtttctaaatttcaaattatctcaaaaattatctccacaacaaattcag ttgatgaagctaattcaattgcctacccaagcttttgaagcccgtttgttagaagaaatg aacgaaaatcctgcattagaaggcggtgatgaccaagaagaaatttacgaaaaagatgag tttgataataatgacgattacgatgagtatgaagacaatgatagcatagattctggcgac ataaatatagacgagtatttaagtaacgacgaaacgccagattacaaaacacaagccaat aattatagcgatgatgatgatgaaagagaatcaccattatcggcaccagttagttttcat caagatttaattaatcaactaaacacctttattttaacagacgatcagcgtaatattgcc gaatttcttgtgggaagtatcgatgatatggggtatataagacgtacaatacaagatatt gtagatgatatggcgtttacccaaggtatttataccgatgaaaaaacggtcgaaaaaata ttgcatattgttcacgaattagaaccatctggcgtaggcgcaagagatttgcaagagtgc ttgttgcttcaattgaagcacaaaacgcctacggaatctgttgcattagcgatgaatatt attcaagatcagtttgaagcttttactaaaaagcattatgacaaattgatgttaaagttt tcagtttctcgagaacaactcaaaaacggaatcgacgaaattgaaaggttaaacccaaaa ccaggaggcgcttataccggaagcaacaaaataaccgaacacgtggttcctgattttgct ataaaaattattgatgacgaattagaactaaccttaaacggaagaaatgcacccgaactt catgtttcgaaagattatcaagacatgatgaaaacctataaggattctaaagacaaatcg aacgcacagaaagatgccgttcagtttatcaaacaaaaattagattctgcaaaatggttt atcgatgcaataaaacaacgtcaggaaacattatatgttacaatgaatgccatcatgcat tttcaacaagagtattttcttgatggtgatgaggctaacttaaaaccaatgattcttaag gatattgccgatatgataggattagacatttcaactgtttcccgtgtggcaaacagcaaa tatgtagatacaccttatggtacaaagctaattaaagagttttttagtgaagccatgaca aatgaccaaggcgaagaagtttcgactatagaaattaaaaatattcttcaaacagttatt gcagaagaagacaagaacaagccgctaccagacgaccaattggcagaaatattaaaagaa aaaggctatcctattgcccgaagaaccattgctaaatatcgtgaacagttagatattcct gtggcgagaatgagaaaaaaaatgtaa

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