Flavobacterium psychrophilum FPG101: FPG101_03575
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Entry
FPG101_03575 CDS
T03281
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fpy
Flavobacterium psychrophilum FPG101
Pathway
fpy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FPG101_03575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpy03021
]
FPG101_03575
Transcription machinery [BR:
fpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FPG101_03575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
PgaD
DUF7056
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AIN71093
LinkDB
All DBs
Position
complement(792717..793580)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSNERPPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIIESLRTEIERSLETLTPREADVVRLYFGL
ADQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaattaccaagcaggttaccaatcgtgaaaccgcatcgttagacaaa
tatttacaagaaattggaaaagtagatttgattactgccgatgaagaggtagaattggct
caaagaataaaagccggagaccaacgtgcgttagaaaaactaacaaaagccaacttgcgt
ttcgtggtttcggtagcaaaacaatatcaaaaccaaggacttacccttccagatttaatc
aatgaaggaaatttaggcctaataaaagcagcacaacgatttgacgaaactcgtggtttc
aaattcatttcgtatgccgtttggtggatccgtcaatcaatactacaagcattggcagaa
caatctcgtattgtacgtttgccattaaacaaaattggttctatcaataaaatcaacaaa
atgtacgctttattagaacaatctaacgagcgtccaccatctgctgaagaaattgcaaaa
gaactagacatgaccgtaaatgacgtaaaagagagcatgaaaaactctggccgtcactta
tctatggatgcccctcttgtagaaggagaagactctaacctttacgacgttttgcgctct
ggagaatcaccaaatcctgacagagaattaattatcgaatctttgcgtaccgaaattgag
cgttctctagaaacactaacgcctcgtgaggccgatgtagttcgtttgtattttggtctt
gctgaccagcacccaatgacattagaagaaattggagaaaccttcgatttaactcgggag
cgtgtacgccaaataaaagaaaaagcaatccgcagattaaaacatacctcaagaagtaaa
atcttgaaaacgtatttaggataa
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