Flavobacterium psychrophilum FPG101: FPG101_06135
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Entry
FPG101_06135 CDS
T03281
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpy
Flavobacterium psychrophilum FPG101
Pathway
fpy03420
Nucleotide excision repair
fpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPG101_06135
03430 Mismatch repair
FPG101_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpy03400
]
FPG101_06135
Enzymes [BR:
fpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPG101_06135
DNA repair and recombination proteins [BR:
fpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPG101_06135
MMR (mismatch excision repair)
Other MMR factors
FPG101_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
PhoH
nSTAND3
AAA_11
NPHP3_N
UvrD_C
DEAD
T2SSE
AAA_22
SLFN-g3_helicase
AAA_7
PIF1
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIN71530
LinkDB
All DBs
Position
1330201..1332102
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AA seq
633 aa
AA seq
DB search
MVKTGLVLEKKDEFQEIMEHIKNGNNFLLSGGAGSGKTYSLVQVIKQVIEDNPTSKVACM
TYTNAAVKEIEERVNHDNLNVTTIHDFLWDNIKHFQKDLKSTLVKLINDEDVTKIKIENE
TVPFDYFDSLEDEIQYKEYLRLKEGIISHDELLIVANSMFQRFPKLCDILKDRYQFIFID
EYQDTHKEVIEIFLTHLNQSKKKNIIGFFGDAMQSIYPDGIGNLDEYKGDEAEKVKEVKK
DQNRRNPKLVYELANRLRVNADGLIQTHSDENNAPNMSVGIVKEGNIKFAYSNDGNLQTF
RDYLGWDFSNSKETKELNLTHNLIAGKAGFRGLMEIYDRDRIIELKNKITKKIKEDNIEI
SEEATFGEVIDQVNLPVKSSTQVGQFITQNNDLYTTARNYPFTVFRKIYLDKDQLLDDKK
QDKEDENKKGSKRDHLIKHLFKIQNNISLYQNRKYNEFLRITDFRYNFKNIEQKRLLQKN
IIELIDVGDKTIEQIITEANEKGICLVDDNLMRFITEKEYVYNRVKNIRFSEFQKLYDYL
EGATPFSTQHKTKGDEFNNVLVILDNGKWNDYNFEYLFLNIGSPSVLERTQKIFYVCCTR
AKENLAVYYHNPKPTVIEKAKELFGAKNVVCLD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaacaggattagttttagaaaagaaagatgagtttcaagaaattatggaacac
atcaaaaatggtaataactttcttttaagtggtggagctggaagcggaaaaacctattct
cttgtacaagttattaaacaagttattgaagataatccaacttctaaagttgcttgtatg
acatatacaaatgcagctgttaaagagattgaagaaagagtaaatcacgacaatctaaat
gttaccaccatacacgattttctttgggataatatcaagcattttcaaaaagatcttaaa
tctactctagtaaaattaataaatgatgaagatgtaacaaaaataaaaattgaaaatgaa
actgtgccatttgattattttgatagtttagaagacgaaattcaatacaaagaatattta
cgcttgaaagaaggtattatttctcacgatgaattattaattgttgccaacagtatgttt
caacggtttccaaaactatgtgatattttaaaagaccgataccaatttatatttattgat
gaatatcaggatacgcacaaagaagtaattgaaatatttcttactcatttaaatcaaagt
aaaaagaaaaatataattggtttctttggcgatgctatgcaatctatttacccagatggt
atagggaatttggacgaatataaaggtgatgaagctgaaaaggtaaaagaagttaaaaaa
gatcaaaaccgaagaaatccaaaattggtatatgaattagcaaacagattacgagttaat
gctgatggattaattcaaacccattccgatgaaaataatgcaccaaatatgtcggtagga
atcgtaaaggagggtaatataaaatttgcttattcaaatgatggtaatttacaaaccttt
agagattatttaggatgggatttttcaaattcaaaagaaacgaaagaattaaatttaaca
cataatttaattgctggaaaagctggattcagaggtttaatggaaatatatgatcgtgat
agaataatcgagctaaaaaataagattacaaaaaaaatcaaagaagataatatcgaaatt
tctgaagaagcaacgtttggagaagttatcgatcaagtcaatttacctgtaaaatcttca
acacaagtggggcagtttatcactcaaaataatgatttatacacaactgcaaggaattat
ccatttacagtttttagaaaaatatacctagacaaagaccaattattagacgataaaaaa
caggataaagaagatgaaaataaaaaaggttcaaaaagagaccatttgataaagcatctt
ttcaaaattcaaaataatatttcattatatcaaaacagaaaatacaatgaatttttaaga
attactgatttcagatataattttaaaaatattgaacaaaaacgattattacaaaaaaac
ataattgaattaattgatgttggagataaaacaattgaacaaataattacagaagccaat
gaaaaaggaatttgtcttgttgatgataatttgatgagatttataactgaaaaagaatat
gtttataatcgagtaaaaaatataagattttctgaatttcaaaagctatatgattattta
gaaggtgctacgccattctcaactcaacataaaacaaaaggcgatgaattcaacaatgtt
ttagttattttagataatggtaaatggaatgattataacttcgaatatttgtttttaaat
attggttcaccaagtgttttagaaagaactcaaaaaatattttacgtttgttgtacgaga
gcaaaagaaaatttagctgtttactatcataatccgaaaccaacggttattgagaaggca
aaagaattatttggagctaaaaatgtggtttgtttagattaa
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