Flavobacterium psychrophilum FPG101: FPG101_06620
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Entry
FPG101_06620 CDS
T03281
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpy
Flavobacterium psychrophilum FPG101
Pathway
fpy03030
DNA replication
fpy03430
Mismatch repair
fpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPG101_06620
03430 Mismatch repair
FPG101_06620
03440 Homologous recombination
FPG101_06620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpy03032
]
FPG101_06620
03400 DNA repair and recombination proteins [BR:
fpy03400
]
FPG101_06620
Enzymes [BR:
fpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPG101_06620
DNA replication proteins [BR:
fpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPG101_06620
DNA repair and recombination proteins [BR:
fpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPG101_06620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIN71603
LinkDB
All DBs
Position
complement(1440591..1441157)
Genome browser
AA seq
188 aa
AA seq
DB search
MLDWLKKIGKDYPEFWKNYLVQFEMQTERKVALYIETTGINPAKDKIISIGAIAIEKNQI
RIDNCLEIELNKAEILEGKDFSYQEIQAIESLINFIGNATLVGHRIHYDIQIINEYLHKL
QSGRIKNNLLDVEVMHGRIIDQNAKQFSLTELLSIYKIDSPHIPTSANMAFSIALLFLKL
KSRLKMTN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattggttaaaaaaaataggcaaagattacccagaattttggaaaaattacctt
gttcagtttgaaatgcaaaccgaaagaaaagttgcattatatatagaaacaacgggaata
aatccagctaaagataaaattatatctattggcgccattgccatcgaaaaaaatcagatt
cgtatagacaattgtttagaaatagaactaaataaagccgagatattagaaggtaaagac
tttagttaccaagagattcaggctatagaatccttaataaattttataggaaatgcaact
ctggtagggcatcgcattcattatgacattcaaattattaatgagtatttgcataaattg
cagagtggtcgcattaaaaataacttgctagatgttgaagtgatgcatggcaggattatt
gaccaaaatgctaaacaattttcattaaccgaattgttatcaatttataaaattgattct
ccacatattcctacatcggcaaacatggcattttcaatagctttgctgtttttgaaatta
aaaagcagattaaaaatgactaattaa
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