Flavobacterium psychrophilum FPG101: FPG101_11150
Help
Entry
FPG101_11150 CDS
T03281
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fpy
Flavobacterium psychrophilum FPG101
Pathway
fpy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPG101_11150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpy03021
]
FPG101_11150
03400 DNA repair and recombination proteins [BR:
fpy03400
]
FPG101_11150
Enzymes [BR:
fpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPG101_11150
Transcription machinery [BR:
fpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPG101_11150
DNA repair and recombination proteins [BR:
fpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPG101_11150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
H_lectin
Motif
Other DBs
NCBI-ProteinID:
AIN72359
LinkDB
All DBs
Position
complement(2411933..2412925)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSIRIE
GVDHEFSTIPGVVEDVTEIILSLKQVRFKRQIEDIDNESVTIAISGKNQITAGDFQKYIS
GFQVLNPELVICNLDSKVNFNMEMTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAIKNLTFGMDLAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaattttcagaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaagtttgaattcagacctttagaacctggttacggattaacagttggtaacgca
cttagaagagttttactttctgctttagaaggttacgcaatcacatctatccgtatagaa
ggtgtagatcacgaattctcaactattcctggagttgttgaagatgttacagaaattatt
cttagtcttaaacaagtgcgtttcaaacgtcaaatagaagacatagataacgaatctgtt
accattgcaatctcaggaaaaaatcaaattactgctggtgatttccaaaaatatatttct
ggttttcaagtattaaacccagaattggtgatttgtaacttggacagtaaagtgaacttt
aacatggaaatgactatcgaaaaaggtagaggatatgttccagctgaagaaaacaaaaaa
caaaatgctgcaattggtactatttttaccgattctatctttacaccagtaaagaatgtg
aaatatgcaattgaaaacttccgtgtagagcaaaaaacagattacgaaaaattagttttt
gaaataaaaactgacggatctattaatccaaaagatgcccttactgaagctgcaaaagta
ttaattcaccatttcatgttgttctctgacgaaagaattacacttgaagctgatgaaata
gcccaaacagaatcttatgacgaagagtcattacatatgagacaactgcttaaaactaag
cttgtagatatggatctttctgtaagagcattaaattgcttaaaagcagctgaagttgat
acattaggtgacttagtatcattcaacaaaaatgacttaatgaaattccgtaattttggt
aaaaaatctttaacagaactagacgaactagtagctattaaaaatttaaccttcggaatg
gatttagcaaaatacaaactagataaagaataa
DBGET
integrated database retrieval system
