Francisella philomiragia GA01-2794: LA55_1002
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Entry
LA55_1002 CDS
T03620
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA55_1002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpz03019
]
LA55_1002
Enzymes [BR:
fpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LA55_1002
Messenger RNA biogenesis [BR:
fpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LA55_1002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
HI1480
MerR-DNA-bind
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AJI53482
UniProt:
A0A0B6D5C9
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All DBs
Position
1043992..1045329
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AA seq
445 aa
AA seq
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MQFSDLGLNPLICSALEKKGYTKPTPIQAKAIPLVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNALKFDSLNTFVLDEADRMLDMGFINDLKRIHKLLPKKLQ
TLMFSATFSPEIKNLANEFLDNPQSVSADVVNTTVKKITQKIYTLDKSTKINALISLIKD
QDLHQVLVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKDINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSRKTKAKKVDEVKIIAAKRANKNNKNTNQKKSSNH
NKDFAKKIKQKIHQNKSVRKPKAQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagatttaggtttaaatcctttaatatgtagcgctttagaaaagaaaggc
tatacaaaaccaactccaattcaagccaaagcgataccattagttctaaaaggtaatgat
gtcatggcatctgcccaaacaggaacaggcaagacagcaggcttcacattaccaattatc
caaagacttcttgatcaaccaaaagctcaagcaaatagaatcaaaactttgattctaact
cctacaagagagttagcagcacaaatacaagaacaaattcaaatatatgcagcaaataca
catatccgttcagcagtggtttttggtggtgttagtataaatcctcaaatgatgaagtta
cgcaaaggtgttgagattttaatagctactccaggtagattgcttgatttatatagtcag
aatgctcttaaatttgatagtttaaatacatttgttttagatgaagcagacagaatgtta
gatatgggttttattaatgatttaaaaagaatccataagcttttaccaaaaaagttacaa
acactaatgttctctgctacattctcaccagagataaaaaatcttgcaaatgagtttctt
gataatcctcaatcagtatcagcagatgttgtaaatacaacagtcaaaaagattactcag
aaaatttatacactggataaatcaactaagattaatgctttgatttcactaataaaagat
caagatctacatcaagttttagttttttcacgtacaaagcatggtgctaataagatatca
gagaaactaaataatgctggtataacaagtagtgcaatacatggtaataaaagtcaaaca
gctagaactaaggcattagcagattttaaatctaaagatataaatgtcttagttgcaact
gatattgcagctcgtggaattgatatcgcgcaactgccatgtgtgatcaatcttgattta
ccaaatgttgctgaagattatgtccatagaataggcagaactggtagagcagggcaagat
ggtttagctatttctttagtaagtgcagatgaagttgaatcactatcaaatatagaacat
ttaattgggcatcttttaccaagagaagagttagaaggttttgaagcgactcataatgtt
cctattacaagtatgtcacgcaaaactaaggctaaaaaagttgatgaagttaaaataata
gctgcaaagagagcaaataaaaataataaaaacactaatcaaaagaaaagctcaaatcat
aataaagattttgcaaaaaaaataaaacaaaaaattcatcagaataaaagtgtcagaaag
ccaaaggctcaagattaa
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