Francisella philomiragia GA01-2794: LA55_106
Help
Entry
LA55_106 CDS
T03620
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fpz
Francisella philomiragia GA01-2794
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpz03016
]
LA55_106
Enzymes [BR:
fpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LA55_106
Transfer RNA biogenesis [BR:
fpz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LA55_106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
WHD_RNase_II
RNase_II_C_S1
FAD_syn
Motif
Other DBs
NCBI-ProteinID:
AJI53952
UniProt:
A0A0B6D6R5
LinkDB
All DBs
Position
107415..109289
Genome browser
AA seq
624 aa
AA seq
DB search
MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVLENDFDLA
KLEKLEIPELELTWELLQEQQQTSINELSELFFESVGANQAYTVWLLVSEGEYFSFNDDF
TINIHSQEQKDQIVSDKQEKLKKEQELNDFIERLNNKTFNIEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGAELESNPAEFKYNFGSDSQRVD
LTHLTAYAIDDEGSNDPDDAISWDDQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHIITMLPPQATQKLGLGLQEVSPALSVGFRLDESGDIHDIEICFSNIKVTRYSYEFVE
ENISALKLGDIEVYAKYFTDKRLAKGAVELDFPEIKISLDSDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLEQDDLENIDSIADMFATRKKLQRGKYSTE
PSIHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISVDDVDNIIVQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQATVIEKLDKGRLMVSISDLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcattaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattacctgcaaaaaatgtccaaatacttacagttttagaaaatgattttgatttggct
aaacttgagaaattagaaattcctgagttagagttaacatgggagttattacaagagcaa
caacaaacatcaattaatgaattaagtgagcttttttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggtttctgagggagagtattttagctttaatgatgacttt
actatcaatattcattcacaagagcaaaaagatcaaatagttagcgataaacaagagaag
ctcaaaaaagaacaagaactaaatgactttatagagcgtcttaataataagacttttaat
attgaagacacaaaatttcttaaagaaatagaggctttagcgacacttaaaagtacaaaa
tgtcgtttctttaaatacttaaatatggaggagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattttttaatccttatctatatcgatatggtgcggag
ttagaaagtaatcctgcggaatttaaatataattttggatcagatagtcagcgtgtcgat
ctaacacatctaaccgcttatgctatagatgatgagggtagtaatgatcctgatgatgcg
attagttgggatgatcaacaaaataaaatgtgggttcatatagctgatccatcttctagc
ataagttttggcgatgaagtagatcttgaagctagagcgcgaggttctaatttatatgta
ccagagcatataatcacaatgttgccacctcaagcaacacaaaagttaggtttaggccta
caagaagtttctccagctttgtcagtaggatttagacttgatgagtcaggagatattcat
gatattgaaatatgttttagtaacataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctgctctaaaacttggagacatagaggtttatgctaaatatttcactgat
aagcgtttggcaaagggagcagtagagcttgattttcctgagataaaaatatcattggat
agtgataagaatgtcaaactaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctaatggctggagtggctattggacagttttgtaaagaaaataatatttgt
gtacctttttcaacacaaccagagcatgatcttgagcaggatgatttagagaatattgat
tcaatagccgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagag
ccaagtattcatgcaggtatgggtttagattcttatgtacaagtgacaagccctctaaga
agatatttagatttacttgttcattatcaattacgtaatttcttagaaaataagcaaatg
attagtgttgatgatgttgataatataattgttcaagtagatattcctattaagtcaaat
agacaaacggagcgtttttctaattcacattggaaattagtatatctaatgcagaatcct
aatttagagttccaagcaacggttattgaaaaactagataaaggtcgtttaatggtttct
atctcagatttagcgatgactaaaaaacttgctgttagtggtaagtatgatttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
DBGET
integrated database retrieval system
