Francisella philomiragia GA01-2794: LA55_1086
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Entry
LA55_1086 CDS
T03620
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fpz
Francisella philomiragia GA01-2794
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LA55_1086 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpz03021
]
LA55_1086 (rpoD)
Transcription machinery [BR:
fpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LA55_1086 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Arc_C
LSU
Annexin
Motif
Other DBs
NCBI-ProteinID:
AJI52426
UniProt:
A0A0B6D0T0
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All DBs
Position
complement(1125958..1127694)
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AA seq
578 aa
AA seq
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MTREDLLSDLKDLMVDGKERGYLTRADILDALPGDVSEDPKKYEEIEAILIDAGIDVYDR
TPELDEDDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTE
VFSTILSYPIVVKTYIERFRELEEKAVDYMASQDIEDEPVAKYIRFNEIMAGFSDEQITE
EKVAEDDHDEKIDTQRAYDFFTNLEKMFEEYQEKSNKKLYSKIVKEFESLRLSTSHLQKL
VDYIRLPYARVKEFERKILRLCVERSRTPRQEFIKVYEIGSIEWLLPLTKKYKFTDNTIK
EIHNLTKQINQFQSLMMMEIEELKKVNIEISKSEAKITQAKKEMIEANLRLVVSEAKKYT
NRGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVH
MIETINKVNRIKRQILQEKGREATEEEIIEYTPNMTKDKLKKILNISHTPISMESPIGDD
EDSTVGDFIEDKNNYSPIEAANLENLREAIKELIDTGLTEREAKVLMMRFGIGMNTDHTL
EEVGKQFNVTRERIRQIEAKALRKLKHPSRSAFLKTFL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagaagatttactttctgatctaaaagatctcatggttgatggtaaagaaaga
ggctatttaactagagcagatattttagatgcattgccaggagatgtgtcagaagatcca
aaaaaatatgaagaaatagaagctatccttatagatgctggtattgatgtatatgataga
actcctgagttagatgaagatgatgatgaaagaaaagtaagcgaagcgaacttagatgat
ttaaaaggaaaaacatctgatcctattcgtatgtatatgcgtgaaatggggatagttgac
cttttagataaaaaaggtgaaactgatatcgctattaggatcgaagaaggcactactgaa
gtttttagtactattttgagttatccaatagttgtcaaaacttatattgagcgttttcgt
gagttagaagagaaggcggttgattatatggcttctcaagatattgaagatgagccagtt
gctaagtatattcgttttaatgaaattatggctgggtttagtgatgaacagataactgaa
gaaaaagttgcagaagatgatcatgatgagaaaattgatactcaaagggcttatgatttc
ttcacaaatcttgagaaaatgtttgaagagtatcaagaaaagtcaaacaaaaaactttat
agcaaaatagtcaaagagtttgaaagtttgagattgtctacttctcatttacagaaatta
gttgattatattaggcttccttatgcaagagttaaggagtttgagcgaaaaattcttaga
ttgtgtgtggaaagatcgagaactcctcgtcaagaatttataaaagtgtatgaaatagga
tctattgaatggctactaccattaactaaaaagtataaatttacagataatactattaaa
gaaatccataatttaacaaaacaaattaatcaattccagagtctgatgatgatggaaatt
gaagagcttaagaaagttaatattgagatttctaaaagtgaagcaaaaattactcaagct
aaaaaagaaatgattgaagcaaatttaagattagttgtttctgaagctaaaaaatatacc
aatagaggattacattttttagatatcattcaagaaggtaatatcggcttaatgaaagct
gtagataaatttgattatcgtaaaggttttaagttttcaacttatgcgacttggtggatt
cgccaagcaattactcgctcaattgctgaccaggctagaacaattcgtgtacctgtgcat
atgattgagactattaataaagttaatagaattaagcgtcaaattcttcaagaaaaaggt
cgtgaggctacagaggaggaaattatagaatatactccgaatatgactaaagataagctt
aaaaagattcttaatatatctcatactccaatctctatggaaagcccaattggggatgat
gaagactctacagttggtgattttattgaggataaaaataattattctccgatagaggct
gcaaatttagagaatctaagagaagctattaaggagcttattgatactggtttaactgag
agagaagcaaaggttcttatgatgcgctttggtattggtatgaatacagatcatactcta
gaagaggtaggcaagcagtttaatgtcactagagagcgtattagacagattgaggcgaaa
gctcttagaaagcttaagcatccatcaagatcagcatttttgaagacatttttataa
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